Gene detail

Detailed information of ANN39580-RA in Montipora grisea

Genomic Location: Scaffold_9433__1_contigs__length_19159:7313...8662
NR annotation: MCE3247639.1, Coproporphyrinogen oxidase, anaerobic [Geminicoccaceae bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
O31381	Oxygen-independent coproporphyrinogen III oxidase OS=Bradyrhizobium diazoefficiens (strain JCM 10833 / BCRC 13528 / IAM 13628 / NBRC 14792 / USDA 110) OX=224911 GN=hemN PE=3 SV=2
O67886	Oxygen-independent coproporphyrinogen III oxidase OS=Aquifex aeolicus (strain VF5) OX=224324 GN=hemN PE=3 SV=1
Q51676	Oxygen-independent coproporphyrinogen III oxidase OS=Paracoccus denitrificans (strain Pd 1222) OX=318586 GN=hemN PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF04055	Radical_SAM	Radical SAM superfamily	Domain	Interproscan
PF06969	HemN_C	HemN C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR007197	Domain	Radical SAM	Interproscan
IPR004558	Family	Oxygen-independent coproporphyrinogen III oxidase HemN	Interproscan
IPR023404	Homologous_superfamily	Radical SAM, alpha/beta horseshoe	Interproscan
IPR010723	Domain	HemN, C-terminal	Interproscan
IPR034505	Family	Anaerobic coproporphyrinogen-III oxidase	Interproscan
IPR006638	Domain	Elp3/MiaA/NifB-like, radical SAM core domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13932	COPROPORPHYRINIGEN III OXIDASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0051536	Molecular Function	iron-sulfur cluster binding	Interproscan
GO:0004109	Molecular Function	coproporphyrinogen oxidase activity	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006779	Biological Process	porphyrin-containing compound biosynthetic process	Interproscan
GO:0006782	Biological Process	protoporphyrinogen IX biosynthetic process	Interproscan
GO:0051539	Molecular Function	4 iron, 4 sulfur cluster binding	Interproscan
GO:0051989	Molecular Function	coproporphyrinogen dehydrogenase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K02495	hemN, hemZ; oxygen-independent coproporphyrinogen III oxidase	EC:1.3.98.3	Porphyrin metabolism	ko00860	deepkoala