Detailed information of ANN39637-RA in Montipora grisea

Genomic Location: Scaffold_9658__1_contigs__length_17636:1404...2741
NR annotation: MYA13298.1, histidine--tRNA ligase [Acidimicrobiaceae bacterium]
Species Montipora grisea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
A4FBB7Histidine--tRNA ligase OS=Saccharopolyspora erythraea (strain ATCC 11635 / DSM 40517 / JCM 4748 / NBRC 13426 / NCIMB 8594 / NRRL 2338) OX=405948 GN=hisS PE=3 SV=1
B1VDK9Histidine--tRNA ligase OS=Corynebacterium urealyticum (strain ATCC 43042 / DSM 7109) OX=504474 GN=hisS PE=3 SV=1
P60917Histidine--tRNA ligase OS=Mycolicibacterium paratuberculosis (strain ATCC BAA-968 / K-10) OX=262316 GN=hisS PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0017424 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF03129
all species →		HGTP_anticodonAnticodon binding domainDomainInterproscan
PF13393
all species →		tRNA-synt_HisHistidyl-tRNA synthetaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR015807
all species →		FamilyHistidine-tRNA ligaseInterproscan
IPR045864
all species →		Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR006195
all species →		DomainAminoacyl-tRNA synthetase, class IIInterproscan
IPR036621
all species →		Homologous_superfamilyAnticodon-binding domain superfamilyInterproscan
IPR033656
all species →		DomainHistidyl-anticodon-bindingInterproscan
IPR004516
all species →		FamilyHistidine-tRNA ligase/ATP phosphoribosyltransferase regulatory subunitInterproscan
IPR041715
all species →		DomainClass II Histidinyl-tRNA synthetase (HisRS)-like catalytic core domainInterproscan
IPR004154
all species →		DomainAnticodon-bindingInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR43707
all species →		HISTIDYL-TRNA SYNTHETASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0004821
all species →		Molecular Functionhistidine-tRNA ligase activityInterproscan
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0006427
all species →		Biological Processhistidyl-tRNA aminoacylationInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
KOEnzymeEnzyme IDPathwayMap IDSource
K01892HARS, hisS; histidyl-tRNA synthetaseEC:6.1.1.21
Transfer RNA biogenesisko03016deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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