Detailed information of ANN39651-RA in Montipora grisea

Genomic Location: Scaffold_7114__1_contigs__length_25594:7169...7717
NR annotation: MCR9270449.1, phenylalanine--tRNA ligase subunit alpha [Hyphomonadaceae bacterium]
Species Montipora grisea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q0C530Phenylalanine--tRNA ligase alpha subunit OS=Hyphomonas neptunium (strain ATCC 15444) OX=228405 GN=pheS PE=3 SV=1
Q9A9E4Phenylalanine--tRNA ligase alpha subunit OS=Caulobacter vibrioides (strain ATCC 19089 / CIP 103742 / CB 15) OX=190650 GN=pheS PE=3 SV=1
B8H307Phenylalanine--tRNA ligase alpha subunit OS=Caulobacter vibrioides (strain NA1000 / CB15N) OX=565050 GN=pheS PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0233556 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02912
all species →		Phe_tRNA-synt_NAminoacyl tRNA synthetase class II, N-terminal domainDomainInterproscan
PF01409
all species →		tRNA-synt_2dtRNA synthetases class II core domain (F)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR004188
all species →		DomainPhenylalanine-tRNA ligase, class II, N-terminalInterproscan
IPR002319
all species →		DomainPhenylalanyl-tRNA synthetaseInterproscan
IPR045864
all species →		Homologous_superfamilyClass II Aminoacyl-tRNA synthetase/Biotinyl protein ligase (BPL) and lipoyl protein ligase (LPL)Interproscan
IPR010978
all species →		Homologous_superfamilyClass I and II aminoacyl-tRNA synthetase, tRNA-binding armInterproscan

 PANTHER
No PANTHER signature was detected for ANN39651-RA. This gene does have a gene model — the search simply returned no hit.
 Gene Ontology
GO termCategoryDescriptionSource
GO:0000166
all species →		Molecular Functionnucleotide bindingInterproscan
GO:0004826
all species →		Molecular Functionphenylalanine-tRNA ligase activityInterproscan
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0005737
all species →		Cellular ComponentcytoplasmInterproscan
GO:0006432
all species →		Biological Processphenylalanyl-tRNA aminoacylationInterproscan
GO:0000049
all species →		Molecular FunctiontRNA bindingInterproscan
GO:0004812
all species →		Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0043039
all species →		Biological ProcesstRNA aminoacylationInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN39651-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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