Gene detail

Detailed information of ANN39731-RA in Montipora grisea

Genomic Location: Scaffold_4695__1_contigs__length_31470:5441...7072
NR annotation: MCG8417316.1, sigma-54-dependent Fis family transcriptional regulator [Pseudomonadota bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q9K4V0	Nitric oxide reductase transcription regulator NorR1 OS=Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337) OX=381666 GN=norR1 PE=2 SV=2
P0AFU4	Transcriptional regulatory protein GlrR OS=Escherichia coli (strain K12) OX=83333 GN=glrR PE=1 SV=1
P0AFU5	Transcriptional regulatory protein QseF OS=Escherichia coli O157:H7 OX=83334 GN=qseF PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02954	HTH_8	Bacterial regulatory protein, Fis family	Domain	Interproscan
PF01590	GAF	GAF domain	Domain	Interproscan
PF00158	Sigma54_activat	Sigma-54 interaction domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR002078	Domain	RNA polymerase sigma factor 54 interaction domain	Interproscan
IPR025944	Conserved_site	Sigma-54 interaction domain, conserved site	Interproscan
IPR003018	Domain	GAF domain	Interproscan
IPR025943	Binding_site	Sigma-54 interaction domain, ATP-binding site 2	Interproscan
IPR002197	Domain	DNA binding HTH domain, Fis-type	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR003593	Domain	AAA+ ATPase domain	Interproscan
IPR029016	Homologous_superfamily	GAF-like domain superfamily	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR32071	TRANSCRIPTIONAL REGULATORY PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0008134	Molecular Function	transcription factor binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0043565	Molecular Function	sequence-specific DNA binding	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K07391	comM; magnesium chelatase family protein	-	Protein processing	-	deepkoala