Gene detail

Detailed information of ANN39740-RA in Montipora grisea

Genomic Location: Scaffold_9225__1_contigs__length_20095:16690...18819
NR annotation: MYE83079.1, 3-hydroxyacyl-CoA dehydrogenase [Gammaproteobacteria bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN39740-RA

ATGGCCTTGCTAGGCACCGTGCATTACGAGGTGCGCGACGGCGTCGCGCTGTTGACCATCGACAACCCGCCGGTGAACCCGATGAGTTCCGGCGTGCGCTTCTACCTGTCGCAGCACTTGCAGACCGCGCTTGCCGACGACGAGGTGACGGCGGTTGTCGTGACCGGCAAGGGGCGGGCATTCGTCGCCGGTGCGGACATTCGCGACTTCGGCAAGACGCCCAACCCGGACGAGCAGCCGAAGCGTGCGGCCGGCGCGCTGATCGAGGGCAGCGCCAAGCCCGTGGTGGCGGCGATCAACGGCACGGCATTCGGCGGCGGCTTGGAGCTCGCGCTCACCTGCCACTACCGCATCGCCGCACCCGGTGCCCCGGTGGGCCTGCCGGAGATCAAGATCGGCCTGCTGCCGGGCGGCGGCGGCACCCAGCGCCTGCCGCGGCTGATCGGCACCGAGCGGGCCATGCAGGCCATCCTGTCGGGGGATCCGTTCGATACCGACGAAGCGCTCGAACTCGGCATCGTCGATGCCGTCGCCGACGGCGAGCTGATCGAGTACGCGATCCGGTTCGCAAAAACCAAAGCCGGTGCCGGACCGCATCCGCTGATTCGCCACCGCCGCGACAAGGTGCTCGCCGACCGCGGCAACCCGGACGTGTTCAAGGCCGGCGAGGCGTATCTTGCCCGGCGCATGCGCGGTCAGTTCAACGGTCGGATGGCGTTCGATTCGGTAAAGGCGGCTGTGGAGCTCGACGACTTCGACGACGGCATCCGCGCCGAGCGCGCCAACTTCCAGCGCTGCCACGATCACGAGCAGCGTGCCGCGATGATTCACGTGTTTTTCGCCGAGCGCCGAGCGGCACGCATCCCGGATGTCGGTCGCGACACGGCGACCAAGCGCATCGCGAGCGCCGCGACCATCGGCGGCGGCTTGATGGGCGGCGGCATCGCCATGTGCTTCGCCGACGCCGGCATTCCGGTCAAGGTGCTCGAAGTCAGCCGGGAAGCGCTCGACAAGGGCCTTGGCGTTATCGCGACGAACTACGGGCGCATGGTGCGGAGCGGCCGGATCACCGCGGCCGAACGCGACGAGCGCATGGGCCGCATCGAGGGCGTGCTCGACTACGCGGCGGTGGCGGATGCGGATGTCGTGGTCGAGGCGGTATTCGAGAACCTCGACCTCAAGAAGCAGATCTTCGAGAAGCTCGACGCGGCCATGAAGCCGGGTGCCGTGCTTGCCAGCAACACCTCGGGCCTCGACCTCGATCAGATGGCGGCGGCGACGAGCCGTCCGCAGCACGTCGTCGGCACGCACTTCTTCAGCCCGGCGAACATCATGCAGTTGCTTGAAGTGGTGCGCGGTGCCGCCACGGACAAGGAGACGCTCGCAACGGCGATGGCGCTCGGCAAGGCGATCGGCAAAGTGCCCGTCATGTCGGCCAACGCACCGGGCTTCATCGGCAACCGCATGCTCGGCGGCTACACGCGGCAAGCGGGCGAGATCATCCTGCACGGGGCGTTGCCGGAGCAGGTGGACAAGGTGGTCTACGACTTCGGCTTCAACATGGGGCCGTTCGCCATGAACGACTTAGTCGGCCTCGACCTCGGCTGGCGGGCGCGCAGGATGGCCGGCGTCGAGGATGCGGACAAGCCGCTGACGGCGATCATCCCGGATCGGCTCTGCGACCTCGGCCGCTACGGCCAAAAGACCGATGCCGGCTTCTACCGCTACGCGCCAGGTTCCCGGCAGGGGCAGCCGGACCCGGAGGTGGCGGCGCTGATCGAGCGCACCTCGGCCGAACTCGGCATCGAGAGACGGGAGGTTGGCGACGACGAGGTGCTGAAGCGCTGCCTGTATCCGCTCGTCAACATCGGTGCGCAGCTGCTCGACGACAGCATCGCCTTGCGCGCCAGCGACATCGACGTCGTGTACGTCCACGGCTACGGGTTCCCGAAGTACCGCGGCGGACCGATGTACTACGCCGACCAGGTCGGCTTGGGCAATGTCTACCGCGACATCCTCAGCTTCCATCAGCGCTACGGCGATGCTTGGCGACCGTCGCCGCTCCTGAAACGCTTGGCGGAGGAGGGGCGTTCGTTCTCCGACTGGGATGCCGACCGTGGCCGCGGCTGA

Transcript

ANN39740-RA

Protein

Uniprot

Uniprot term	Description
Q6NYL3	Peroxisomal bifunctional enzyme OS=Danio rerio OX=7955 GN=ehhadh PE=2 SV=1
Q08426	Peroxisomal bifunctional enzyme OS=Homo sapiens OX=9606 GN=EHHADH PE=1 SV=3
Q9DBM2	Peroxisomal bifunctional enzyme OS=Mus musculus OX=10090 GN=Ehhadh PE=1 SV=4

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00378	ECH_1	Enoyl-CoA hydratase/isomerase	Domain	Interproscan
PF02737	3HCDH_N	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain	Domain	Interproscan
PF00725	3HCDH	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR008927	Homologous_superfamily	6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily	Interproscan
IPR001753	Family	Enoyl-CoA hydratase/isomerase	Interproscan
IPR006176	Domain	3-hydroxyacyl-CoA dehydrogenase, NAD binding	Interproscan
IPR018376	Conserved_site	Enoyl-CoA hydratase/isomerase, conserved site	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR006108	Domain	3-hydroxyacyl-CoA dehydrogenase, C-terminal	Interproscan
IPR029045	Homologous_superfamily	ClpP/crotonase-like domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR23309	3-HYDROXYACYL-COA DEHYROGENASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003857	Molecular Function	3-hydroxyacyl-CoA dehydrogenase activity	Interproscan
GO:0006635	Biological Process	fatty acid beta-oxidation	Interproscan
GO:0006631	Biological Process	fatty acid metabolic process	Interproscan
GO:0070403	Molecular Function	NAD+ binding	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0016616	Molecular Function	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K07516	fadN; 3-hydroxyacyl-CoA dehydrogenase	EC:1.1.1.35	Benzoate degradation	ko00362	deepkoala