Detailed information of ANN39776-RA in Montipora grisea

Genomic Location: Scaffold_1361__1_contigs__length_56408:31074...32588
NR annotation: MBX7112441.1, sigma 54-interacting transcriptional regulator [Dehalococcoidia bacterium]
Species Montipora grisea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
Q00934Response regulator protein PilR OS=Pseudomonas aeruginosa (strain ATCC 15692 / DSM 22644 / CIP 104116 / JCM 14847 / LMG 12228 / 1C / PRS 101 / PAO1) OX=208964 GN=pilR PE=1 SV=2
P29267Hydrogenase transcriptional regulatory protein HoxA OS=Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337) OX=381666 GN=hoxA PE=3 SV=2
P0AFU4Transcriptional regulatory protein GlrR OS=Escherichia coli (strain K12) OX=83333 GN=glrR PE=1 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0100780 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00158
all species →		Sigma54_activatSigma-54 interaction domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR027417
all species →		Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR025662
all species →		Binding_siteSigma-54 interaction domain, ATP-binding site 1Interproscan
IPR002078
all species →		DomainRNA polymerase sigma factor 54 interaction domainInterproscan
IPR003593
all species →		DomainAAA+ ATPase domainInterproscan
IPR009057
all species →		Homologous_superfamilyHomeobox-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR32071
all species →		TRANSCRIPTIONAL REGULATORY PROTEINInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005524
all species →		Molecular FunctionATP bindingInterproscan
GO:0006355
all species →		Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0008134
all species →		Molecular Functiontranscription factor bindingInterproscan
GO:0016887
all species →		Molecular FunctionATP hydrolysis activityInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN39776-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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