Gene detail

Detailed information of ANN39815-RA in Montipora grisea

Genomic Location: Scaffold_790__1_contigs__length_73459:25015...28599
NR annotation: MCP4321189.1, toprim domain-containing protein [Alteromonadales bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN39815-RA

ATGCAAGTAGAAACTACTGAGATCAATGGATTTGCGATTGACGAGTTCAATGTGCATAAGCTTGAGGAGGGAAAGACACAGGGCACCTGCCCTCTCTGCTCTCACACAAGAAAGCCAAAAAATCAGAAAGCAAAATGTGCTTCTTATGATTGGCAACGGGGTCTCGGTACTTGTCATAATTGTCACTCAACCTTCCAACTGCACACTTATAAAAGAAAAGGAGAAATGAATAAAGTATATGAACGTCCTAAGAACGTAGAAATAAAAGCTCCAGCAAGTAATGTAGTTGAATGGTTTAAGACAAGAGGTATATCTCAGCAAACCCTTACTGACCTTAAAATTAGTGAGGGTGCTGAATATATGCCACAAACCGGTAAGCAAGAAAACACTATAAAGTTCAATTACTTTATGGGAGGCGAACTGGTTAATATAAAGTATCGTGACGGACGTAAAAACTTTAAGCTATATAAAGGTGCTGAAAAAGTATTCTACAATATAGATAGTATCATAGGATTTGAATATTGTATAATAGTTGAGGGTGAAATGGACGTGTTAGCGCTGCATGAAGCAGGTATAACTAACGCAGTTTCTGTACCAAACGGAGCTACTTTAAACAACAACAACCTTGACTATCTGGATAATTGTATCGATTACTTTGAAGACAAAGAAAAGATTATTATTGCCGTTGACTCTGATGAAGCTGGGCAAGCGTTACAAACTGAGCTTATTCGTAGGCTAGGTTCCGAAGTTTGCTATACATCATCGTGGGAAGATTGTAAAGATGCTAATGAATACTTATTAAAATATGGAAAAGAAAAGCTGGTATCACGTATCACTGAAGCAAAGCCCGTGCCACTTGAAAACGTTACAACATTCAGAGACATCGAGGGCGAGATCACTGACTTTGTTACTAACGGATTCAAGCCTGGATTTCAGGTCGGCCTTAGGAATTTTGACGATATATTTTCAACTTATACTGGTCAATTTATTACGGTCACTGGTATTCCTTCCAGCGGTAAATCGGATTTTGTCGACCAAATGGTCGTCGGCTATAACAAAAACTATGGTTGGAAAACAGCATTTGCTTCGCCTGAAAATGTACCGACATATCTCCATGCTCATAAGCTCATGCGAAAAGTGTGGCAAGGTATGCCGTCTAAAGAAGACATAGGCTCAGATAAATGGAATCAAGTAGCAGAGCATTGCAATAATAATTTTTATCACATAGATATGGAGCGCTACACGCTTGAATCTGTTTTAAAGAAGGCAGCCGAGCTTGTAAAGCGTAAAGGCATTAAGTGCCTTGTTATAGATCCATTCAACAAAGTACGTGACGTCGATACTAAAACTGAAGATGTTAATAGGTACACTATGGAATATCTTCAAAAAATTGAAGTATTTGCAAAGAAGTTTGATGTGTTAGTGTTTATAGTAGCTCACCCTACTAAAATGTACAAAGATAAAGATGGCAAAATTGAAGAGCCTACAATGTACAATATTAAGGGCGGAGGCGAATGGTATGATGCTTCTTATCATGGGTTATTAGTTCATAGAAATTATGAAGAGGGCACTGTTAAAGCGAAAGTGCTTAAGGTTAAGTTTCAAAACTTAGGTGAAAACGGTGCTGAAGCTCATTTTAAATGGGAACCAAAATCAGAGATCGGGTATAAAAATTTACTCAGTGACATATTAATTAATGGCGAGCTAAAGCCTAATCGCACGGGTACGGACGCTTATTCTGTTTTCAACAGAACGTTAGAGCATGATATGATACAAGGCTTCCCGCTGCTAACGTCTAAAAAAGTTTCTTTTAAAGCTGCGCGTACAGAATTGCTTTGGATATTGCAAGGACGCACGGATTTAAAATACCTTGAGGATAATGGTGTTAAGTACTGGACTCCTGACTACGAGCGCTCAGGACGCACAGATGGAACATTAGGTCCTATATACGGTGCTCAATGGCGTAACTTTGGGGGTGTTGATCAGTTAGCTAATGTTATTAACGAGCTAAAACAAAACCCCAACTCAAGAAGACTATTAGTTAGCGCTTGGAATCCAATTGAGATGGAAGATATGGCTTTACCACCGTGTCACTATGCCTTTCAGCTTTATGTTCGAGATAGCCAATTAGATCTTATGTGGATGCAGCGGTCAGTTGATATGTTTTTAGGCTTACCCTATGATATCGCTATGTATGCTCTACTGCTAGAGCTTATTGCTAAAGAAGCAGGTTATGTTCCAGGCAAACTTATGTGTCAGTTAGGCGATTGCCACATATACGAGAACCACGTTGAACAAGCGCAAAAGTATATTGACAGGCCACGTAGAGTAATGCCTACACTAGAATTAGAATCAGGGATTAAAATAGATGAGCAACTTAACTTGACTATCCCAACTGCCGATCAAATTAAATTATTAAACTACAACCCTTATTCTGCAATCACTGCACCACTAAGCGTTGGTACGTGTATCGATTTAGCTTCTGACTTAGAAGTGCAGTACCAAAAAGCATTCGGCTACGATACCGATTTAAACACTTACAAAAATTTAATCAAAAAAAATAAAATGAAAATTAACGCTACAGAACAGACCTCAACATTTCCTGTCCCGATCAACAAGCTAAAGGGACGTTTAATGGACGTTATTGGATTGACTTGGGAAACACCCCAAGGTTATAAGTTCGAAATAAACTCTAAAACAATTGAGTGGATTATGGCTAACGCTAGAGTCTCGCACTTTAATCCATTAAGGACTTATGTTTATAACAAAGCATTTTACGAAGCCTTCAATAATAAAAAATCTCCAAGCAAGATTGCTGATTGTGTTAATTGTGATTGTTTGCATACCGAAATTTGCCTGTCTAACACTTTAGATATTTTTGAAAACATAAGAGAGTGGGCTTCGGATAGAGGTATTTACGATAAGGGCGATTCTAAAACACAATACATTAAATTGCAAGAAGAGGCAGGAGAGCTAGCTAAAGCATTACTTAAGAATGATGATGATGAAATAATGGATGCAATCGGAGACATAGCTGTAGTTCTTACAAATTTAGCTCACTTAGAAGGGTTAAAAATTGAGGACTGCATTAGCAGCGCTTATAGTGTTATTTCTACTCGCAAGGGCTCAATGATTAACGGTACATTCGTAAAAGAGACATTATAA

Transcript

ANN39815-RA

Protein

Uniprot

Uniprot term	Description
A4INY1	Thymidylate synthase OS=Geobacillus thermodenitrificans (strain NG80-2) OX=420246 GN=thyA PE=3 SV=1
Q5KZ25	Thymidylate synthase OS=Geobacillus kaustophilus (strain HTA426) OX=235909 GN=thyA PE=3 SV=1
C5DAR2	Thymidylate synthase OS=Geobacillus sp. (strain WCH70) OX=471223 GN=thyA PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01503	PRA-PH	Phosphoribosyl-ATP pyrophosphohydrolase	Family	Interproscan
PF13155	Toprim_2	Toprim-like	Family	Interproscan
PF00303	Thymidylat_synt	Thymidylate synthase	Domain	Interproscan
PF03796	DnaB_C	DnaB-like helicase C terminal domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR021130	Family	Phosphoribosyl-ATP pyrophosphohydrolase-like	Interproscan
IPR036926	Homologous_superfamily	Thymidylate synthase/dCMP hydroxymethylase superfamily	Interproscan
IPR006171	Domain	TOPRIM domain	Interproscan
IPR000398	Family	Thymidylate synthase	Interproscan
IPR023451	Domain	Thymidylate synthase/dCMP hydroxymethylase domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR034154	Domain	Archaeal primase DnaG/twinkle-like, TOPRIM domain	Interproscan
IPR007694	Domain	DNA helicase, DnaB-like, C-terminal	Interproscan
IPR020940	Active_site	Thymidylate synthase, active site	Interproscan
IPR045097	Family	Thymidylate synthase/dCMP hydroxymethylase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11548	THYMIDYLATE SYNTHASE 1	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004799	Molecular Function	thymidylate synthase activity	Interproscan
GO:0006231	Biological Process	dTMP biosynthetic process	Interproscan
GO:0003678	Molecular Function	DNA helicase activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006260	Biological Process	DNA replication	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0016741	Molecular Function	transferase activity, transferring one-carbon groups	Interproscan