Gene detail

Detailed information of ANN40063-RA in Montipora grisea

Genomic Location: Scaffold_5671__1_contigs__length_28851:11315...13276
NR annotation: MCP4464440.1, hypothetical protein [Planctomycetaceae bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P28793	Fatty acid oxidation complex subunit alpha OS=Pseudomonas fragi OX=296 GN=fadB PE=1 SV=1
Q87MM3	Fatty acid oxidation complex subunit alpha OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) OX=223926 GN=fadJ PE=3 SV=1
B0KH74	Fatty acid oxidation complex subunit alpha OS=Pseudomonas putida (strain GB-1) OX=76869 GN=fadB PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00378	ECH_1	Enoyl-CoA hydratase/isomerase	Domain	Interproscan
PF00725	3HCDH	3-hydroxyacyl-CoA dehydrogenase, C-terminal domain	Domain	Interproscan
PF02737	3HCDH_N	3-hydroxyacyl-CoA dehydrogenase, NAD binding domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR006180	Conserved_site	3-hydroxyacyl-CoA dehydrogenase, conserved site	Interproscan
IPR001753	Family	Enoyl-CoA hydratase/isomerase	Interproscan
IPR008927	Homologous_superfamily	6-phosphogluconate dehydrogenase-like, C-terminal domain superfamily	Interproscan
IPR050136	Family	Fatty acid oxidation complex subunit alpha	Interproscan
IPR006108	Domain	3-hydroxyacyl-CoA dehydrogenase, C-terminal	Interproscan
IPR029045	Homologous_superfamily	ClpP/crotonase-like domain superfamily	Interproscan
IPR006176	Domain	3-hydroxyacyl-CoA dehydrogenase, NAD binding	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43612	TRIFUNCTIONAL ENZYME SUBUNIT ALPHA	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0006631	Biological Process	fatty acid metabolic process	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0016616	Molecular Function	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	Interproscan
GO:0070403	Molecular Function	NAD+ binding	Interproscan