Gene detail

Detailed information of ANN40194-RA in Montipora grisea

Genomic Location: Scaffold_9089__1_contigs__length_20668:19187...19846
NR annotation: NNG02979.1, sigma-54-dependent Fis family transcriptional regulator [Inquilinus sp.]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q87MX7	Regulatory protein LuxO OS=Vibrio parahaemolyticus serotype O3:K6 (strain RIMD 2210633) OX=223926 GN=luxO PE=3 SV=1
A7MVC2	Luminescence regulatory protein LuxO OS=Vibrio campbellii (strain ATCC BAA-1116) OX=2902295 GN=luxO PE=1 SV=2
P0C5S5	Luminescence regulatory protein LuxO OS=Vibrio harveyi OX=669 GN=luxO PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00158	Sigma54_activat	Sigma-54 interaction domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR025943	Binding_site	Sigma-54 interaction domain, ATP-binding site 2	Interproscan
IPR002078	Domain	RNA polymerase sigma factor 54 interaction domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR025944	Conserved_site	Sigma-54 interaction domain, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR32071	TRANSCRIPTIONAL REGULATORY PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0008134	Molecular Function	transcription factor binding	Interproscan