Genomic Location: Scaffold_2039__1_contigs__length_46603:11389...16681
NR annotation: WP_267682743.1, TonB-dependent receptor [Nannocystis sp. SCPEA4]
| CDS | ||||
| ANN40227-RA | ||||
| Transcript |
| ANN40227-RA |
| Protein |
| ANN40227-RA |
| Uniprot term | Description |
|---|---|
| Q8DL15 | Oxygen-dependent coproporphyrinogen-III oxidase OS=Thermosynechococcus vestitus (strain NIES-2133 / IAM M-273 / BP-1) OX=197221 GN=hemF PE=3 SV=2 |
| P72848 | Oxygen-dependent coproporphyrinogen-III oxidase OS=Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa) OX=1111708 GN=hemF PE=1 SV=1 |
| Q8YZ37 | Coproporphyrinogen-III oxidase, aerobic 1 OS=Nostoc sp. (strain PCC 7120 / SAG 25.82 / UTEX 2576) OX=103690 GN=hemF1 PE=3 SV=1 |
| Pfam accession | Pfam name | Description | Type | Source |
|---|---|---|---|---|
| PF01218 | Coprogen_oxidas | Coproporphyrinogen III oxidase | Family | Interproscan |
| PF00593 | TonB_dep_Rec | TonB dependent receptor | Family | Interproscan |
| PF12849 | PBP_like_2 | PBP superfamily domain | Family | Interproscan |
| PF07715 | Plug | TonB-dependent Receptor Plug Domain | Domain | Interproscan |
| InterPro term | Type | Description | Source |
|---|---|---|---|
| IPR001260 | Family | Coproporphyrinogen III oxidase, aerobic | Interproscan |
| IPR036406 | Homologous_superfamily | Oxygen-dependent coproporphyrinogen III oxidase superfamily | Interproscan |
| IPR000531 | Domain | TonB-dependent receptor-like, beta-barrel | Interproscan |
| IPR024370 | Domain | PBP domain | Interproscan |
| IPR037066 | Homologous_superfamily | TonB-dependent receptor, plug domain superfamily | Interproscan |
| IPR012910 | Domain | TonB-dependent receptor, plug domain | Interproscan |
| IPR039426 | Family | TonB-dependent receptor-like | Interproscan |
| IPR036942 | Homologous_superfamily | TonB-dependent receptor-like, beta-barrel domain superfamily | Interproscan |
| PANTHER term | Description | Source |
|---|---|---|
| PTHR10755 | COPROPORPHYRINOGEN III OXIDASE, MITOCHONDRIAL | Interproscan |
| GO terms | Category | Description | Source |
|---|---|---|---|
| GO:0004109 | Molecular Function | coproporphyrinogen oxidase activity | Interproscan |
| GO:0006779 | Biological Process | porphyrin-containing compound biosynthetic process | Interproscan |
| GO:0005737 | Cellular Component | cytoplasm | Interproscan |
| GO:0006782 | Biological Process | protoporphyrinogen IX biosynthetic process | Interproscan |
Maintained by Dr. Jiajie She from Prof. Longjun Wu's Lab & Prof. Pei-yuan Qian's Lab
Hong Kong Branch of the Southern Marine Science and Engineering Guangdong Laboratory (Guangzhou)
Hong Kong University of Science and Technology
Clear Water Bay, Kowloon, Hong Kong
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