Detailed information of ANN40322-RA in Montipora grisea

Genomic Location: Scaffold_7253__1_contigs__length_25242:1068...2051
NR annotation: WP_014950071.1, MULTISPECIES: 23S rRNA pseudouridine(1911/1915/1917) synthase RluD [Alteromonas]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P65837Ribosomal large subunit pseudouridine synthase D OS=Salmonella typhi OX=90370 GN=rluD PE=3 SV=2
P65836Ribosomal large subunit pseudouridine synthase D OS=Salmonella typhimurium (strain LT2 / SGSC1412 / ATCC 700720) OX=99287 GN=rluD PE=1 SV=2
P65834Ribosomal large subunit pseudouridine synthase D OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=rluD PE=3 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01479S4S4 domainDomainInterproscan
PF00849PseudoU_synth_2RNA pseudouridylate synthaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050188FamilyRluA Pseudouridine SynthaseInterproscan
IPR006145DomainPseudouridine synthase, RsuA/RluA-likeInterproscan
IPR020103Homologous_superfamilyPseudouridine synthase, catalytic domain superfamilyInterproscan
IPR002942DomainRNA-binding S4 domainInterproscan
IPR006225FamilyPseudouridine synthase, RluC/RluDInterproscan
IPR036986Homologous_superfamilyRNA-binding S4 domain superfamilyInterproscan
IPR006224Conserved_sitePseudouridine synthase, RluA-like, conserved siteInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21600MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0001522Biological Processpseudouridine synthesisInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0009451Biological ProcessRNA modificationInterproscan
GO:0009982Molecular Functionpseudouridine synthase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06180rluD; 23S rRNA pseudouridine1911/1915/1917 synthaseEC:5.4.99.23
Ribosome biogenesisko03009deepkoala

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