Gene detail

Detailed information of ANN40441-RA in Montipora grisea

Genomic Location: Scaffold_4805__1_contigs__length_31088:22177...25153
NR annotation: MCP4080533.1, adenylosuccinate lyase [Planctomycetaceae bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN40441-RA

ATGGACCACCAAAACTATCAAAATCCACTGATTACCCGATACTCTTCGTCGGAAATGTCACAGATCTTTGGCGACCAGAAAAAATTCAGCACTTGGCGTAGACTGTGGCTGGCCTTGGCCGAAGCCGAGCAGGATTTGGGGCTGGATATTTCGGATCAGCAATTGGACGAGATGCGAAGTAATCTCGACTCCATCGATTTTGAAGCCGCTGCGAAGCACGAGAAAGCTCTCCGCCACGACGTCATGGCTCACGTCCATACTTTTGCCGACGCCTGTCCCAACGCCGGCAAGGTCATTCACTTGGGAGCTACCAGTTGTTTCGTGACGGACAACGGAGACTTGATTCTGTTTCGGGAAGCCCTGCGTTTAGTAGCGGCTCGTTTGGCAGACGTGATCAGTAAGCTTGGCAAGTTTGCCGATCAATACCGAGATCTCGCTTGCCTTGGTTTCACTCACATGCAACCAGCTCAACCGACCACGATCGGAAAACGGGCGACCCTGTGGACCTACGACCTGGCGATGGACTTGGCCGATTTGGAATATCGAATCGACAATCTGAAAGCCCGCGGCGTTAAAGGCACGACGGGAACCCAAGCCAGCTTTTTGAAGTTGTTTGACGGCAACCATGACAAGGTCGATCAGTTGAACGCCTCTGTCGCAAACAAGATCGGCTTCGAAGATACCTATCAAGTGACGGGACAGACATACAGTCGAAAAATCGACGTCCAAATCCTTGACGCCCTGTCGGCCATCGCCCAATCCACTCATAAGATCGCGACGGACCTTCGCTTGTTGGCCAACCGCAAAGAGGTTGAGGAACCCTTCGAGGCCAAGCAGATTGGTTCTTCAGCTATGCCTTACAAGCGGAACCCGATGCGGTCCGAGCGAATCTGTGCCTTGGCTCGTTACGTCATCAGTTTGCAGAGTAGTCCAGCCAATACGCTGGCCACTCAGTGGATGGAGCGCACTTTGGACGACAGTGCCAATCGACGATTGGTGATGCCTCAAGCGTTCCTGGCGATCGACGCCATCTTGATCATCCTGGGCAACGTCGCCAACGGCATGGTGGTTTACGACAAGGTCATTCAGCGAAACCTGCTGGAAGAACTTCCTTTCATGGCCACCGAGAACATTTTGATGGCGGCCGTCGATAGGGGTGGCAATCGTCAAGAGTTGCATGAACGCATTCGACAACACAGCGTGGCCGCCGGTGCCGCAATCAAGAACGAAGGCCAATCCAATGACTTGCTGAAACGCATTCGGAACGACGATGCCTTCTCAGCGGTCGATTTGGACGAGGTCCTTGCCCAAGGCGGATTCGTAGGTCGGGCGCCCGAACAAGTCGACCAGTTTCTTCGACAGGTGGTAAGGCCAATTGAACAGCGTTACGCAAACCAAAAAGTAGACGAGGTCGGCTTAAAGGTTTCGACTCGCCACGACCAAATCAGCCATTACAACACTGCATTCGAGGAGATTCGCAAAACAGATTTCTCCAGCGATCTTTTGTCGGCCTTGCAAGATGAATTGTTTGCGCCTGGCAACGACGTCTTGGCAGCAACCAACCACTTGGGCCGGATCGCTTGGCGGGCGAACTTGCGACGCAACAGCCTTTTCTTTCCGGTCTACTTGGCCGTGCAATTTTTCTTCCTGTGGGACTTCCACGTGGTGGGACAATTGCAAAAGTGGAAAGCAGAGCATGGCAAAGACGTTGGCCGCTGGTTCGAGATCCTGGGACAAATCGAGGTCCTTGCGGCTTTGGGCCAGTTTGCTGCCGATCACGGTGAATGGCCTCACCCCACCGTCCACGGCAATGATCAGCCGGAACGACGAATCATTTGCAAGAAACTCGGGCATCCACTCATTCATCATGACCAGCGAGTGAATAATGATGTTAGTGTTGGTCCCTCCGGTACCGTTTTGCTGGTAACCGGCTCCAACATGTCCGGCAAGAGTACGCTTCTTCGCTCACTAGGACTGAACGTCATACTTGCTCACCTTGGAGCGCCGGTCTGTGCGGAAGAAATGAGTCTTTCGCCGATGCGGATCGAGACCAGCATGCGAATCGAAGACTCCCTGGCCGATGGCGTCTCGTTCTTTATGCCGAGCTGA

Transcript

ANN40441-RA

Protein

Uniprot

Uniprot term	Description
P21265	Adenylosuccinate lyase OS=Gallus gallus OX=9031 GN=ADSL PE=2 SV=2
P54822	Adenylosuccinate lyase OS=Mus musculus OX=10090 GN=Adsl PE=1 SV=2
A3KN12	Adenylosuccinate lyase OS=Bos taurus OX=9913 GN=ADSL PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00206	Lyase_1	Lyase	Domain	Interproscan
PF10397	ADSL_C	Adenylosuccinate lyase C-terminus	Domain	Interproscan
PF00488	MutS_V	MutS domain V	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR022761	Domain	Fumarate lyase, N-terminal	Interproscan
IPR019468	Domain	Adenylosuccinate lyase C-terminal	Interproscan
IPR020557	Conserved_site	Fumarate lyase, conserved site	Interproscan
IPR000432	Domain	DNA mismatch repair protein MutS, C-terminal	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR004769	Family	Adenylosuccinate lyase	Interproscan
IPR008948	Homologous_superfamily	L-Aspartase-like	Interproscan
IPR000362	Family	Fumarate lyase family	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43172	ADENYLOSUCCINATE LYASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006298	Biological Process	mismatch repair	Interproscan
GO:0030983	Molecular Function	mismatched DNA binding	Interproscan
GO:0004018	Molecular Function	N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity	Interproscan
GO:0009152	Biological Process	purine ribonucleotide biosynthetic process	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0044208	Biological Process	'de novo' AMP biosynthetic process	Interproscan
GO:0070626	Molecular Function	(S)-2-(5-amino-1-(5-phospho-D-ribosyl)imidazole-4-carboxamido) succinate lyase (fumarate-forming) activity	Interproscan