Gene detail

Detailed information of ANN40455-RA in Montipora grisea

Genomic Location: Scaffold_8039__1_contigs__length_23504:4244...6327
NR annotation: KSV74401.1, hypothetical protein N185_18540 [Sinorhizobium sp. GW3]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN40455-RA

ATGGACGCAGGCGGCGTGATCCGCGATCTGTCCGCGCATGTCGGTGATATCGCGGGTGACGCGCTGTCGGATGCGGGCCTCGATGCCCTGCGGGCGCTTGATCCTGCGACGCTGCCCGTCGTTGATGGCAGTCCCCGGATTGGAGCCTGCGTGGGTCAGGTGGGCAAGTTTATCTGCATCGGCCTGAACTATGCCGATCACGCCGCCGAATCCGGCATGGCCCTGCCCGAGGAACCGGTGATCTTCTTCAAGGCGACCTCGGCCATCATTGGCCCCGATGACACGGTGGAAATCCCGCGCGGGTCGGTCAAGACCGATTGGGAGGTCGAGCTTGGCGTCGTGATCGGCAAGCCCACCAAATACGTGCCCGTCGAGGACGCGCTGGATCACGTGGCAGGCTATTGCGTGGTCAATGACCTGTCCGAGCGCGACTTTCAGCTGCACCGCTCGGGCCAGTGGGTCAAGGGCAAGTCCGCAGACACGTTCGGCCCCATCGGTCCTTGGCTGGTGACGCGGGACGAGGTGCCGGACCCGCAAAACCTGCCGATGTACCTTGAGGTCAATGGCCACCGCTATCAGGACGGTTCGACCAAGACGATGCATTTTGACGTGGCAACCGTGATCTCGCACCTGTCGCAGTTCATGTCTCTGCAGCCCGGCGATCATGGAACTGGGCATCGAAGGGCTGGGCGTTCAGCGTCAAACCGTGGAGGCCAGCAAATGACCCGGATAACCGGCATTCGGACCGAGGACCTACGGTTCCCGACCTCTGACAGTCTGGACGGGTCGGACGCGATGAACCCCGATCCGGATTACTCGGCGGCCTATGTGGTGCTTGAAACCGATGGCGCGCATGAGGGCCACGGCCTGACCTTCACCATCGGGCGCGGGAACGAGATTTGCGTGGCCGCGATTGAGGCTTTGGGCGCGCTGATCATCGGGCTGGAACTGGACTGGATTACCGAGGATATGGGCCGGTTCTGGCGTCATATCACCGGCGACAGCCAGCTGCGCTGGATTGGCCCGGACAAAGGCGCGATCCATCTGGCCACAGGCGCGGTGGTGAACGCGGCGTGGGACTTGTGGGCGAAAGAGGCGGGTCAGCCCGTCTGGCAACTGGTCGGCGAGATGAGCCCCGAAGAGATCGTGCGCCTGATCGACTTCCGCTACCTGACCGACGCGATCACGCCGGATGAAGCGCTGGCGCTGCTGCGCGCGGCAGAACCCGGCAAACAGGATCGGATCGCCAAGCTGAAGGCCGAGGGTTATCCCTGCTACACCACATCGGCCGGCTGGCTGGGCTATTCCGACAACAAGCTGCGCCGCCTGTGCCGCGAGGCAAAAGAGGCGGGCTTTACCCATACCAAATTCAAGGTAGGCCGCGATCTGGAAGACGATATTCGCCGCCTGACCATTGCGCGTGAAGTGCTGGGCGAAGACATGAATATCATGATCGACGCCAATCAGGTGTGGGAGGTCGATCAGGCCGTCGACTGGGTCAAGGCCCTGTCCTTTGCACGGCCCTTCTTCATCGAAGAACCCACCAGCCCCGACGATGTGTTCGGCCACAAGGCAATCCGCGAAGGTGTCGCTCCGGTCAAGGTGGCCACCGGCGAGATGTGCCAGAACCGCATCCTGTTCAAGCAGTTCATCAAGGAGGGCGCGATTGACATCGTTCAGATCGACAGCTGCCGGATGGGCGGGTTGAACGAGGTGCTGGCAGTTATGCTGATGGCGGCGAAATACGATCTGCCGGTCTGGCCCCATGCGGGCGGCGTGGGCCTGTGCGAATACGTTCAGCATATGTCGATGATCGACTACGTCGCGATCTCGGGCGAGAAAGACAGCAAGCGGATCGAGTTCGTGGACCATCTGCACGAGCATTTCATCGACCCCTGCGTCGTAAAGAACGGAGCCTACATGGCGCCCACGCAACCAGGGTTCTCGATCGAGATGAAACCCAGCAGCATCAGAGATTTCCGGTTCCTGCCCAAACTGGCAGCGGAATAA

Transcript

ANN40455-RA

Protein

Uniprot

Uniprot term	Description
Q0QWS4	L-galactonate dehydratase OS=Hypocrea jecorina OX=51453 GN=lgd1 PE=1 SV=1
Q8P3K2	L-fuconate dehydratase OS=Xanthomonas campestris pv. campestris (strain ATCC 33913 / DSM 3586 / NCPPB 528 / LMG 568 / P 25) OX=190485 GN=XCC4069 PE=1 SV=1
Q6INX4	Mitochondrial enolase superfamily member 1 OS=Xenopus laevis OX=8355 GN=enosf1 PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF13378	MR_MLE_C	Enolase C-terminal domain-like	Domain	Interproscan
PF02746	MR_MLE_N	Mandelate racemase / muconate lactonizing enzyme, N-terminal domain	Domain	Interproscan
PF01557	FAA_hydrolase	Fumarylacetoacetate (FAA) hydrolase family	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029065	Domain	Enolase C-terminal domain-like	Interproscan
IPR034610	Family	L-fuconate dehydratase	Interproscan
IPR046945	Family	L-rhamnonate dehydratase-like	Interproscan
IPR013342	Domain	Mandelate racemase/muconate lactonizing enzyme, C-terminal	Interproscan
IPR036849	Homologous_superfamily	Enolase-like, C-terminal domain superfamily	Interproscan
IPR036663	Homologous_superfamily	Fumarylacetoacetase-like, C-terminal domain superfamily	Interproscan
IPR013341	Domain	Mandelate racemase/muconate lactonizing enzyme, N-terminal domain	Interproscan
IPR029017	Homologous_superfamily	Enolase-like, N-terminal	Interproscan
IPR018110	Conserved_site	Mandelate racemase/muconate lactonizing enzyme, conserved site	Interproscan
IPR011234	Domain	Fumarylacetoacetase-like, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13794	ENOLASE SUPERFAMILY, MANDELATE RACEMASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016052	Biological Process	carbohydrate catabolic process	Interproscan
GO:0050023	Molecular Function	L-fuconate dehydratase activity	Interproscan
GO:0000287	Molecular Function	magnesium ion binding	Interproscan
GO:0016836	Molecular Function	hydro-lyase activity	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0009063	Biological Process	amino acid catabolic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K18334	fucD; L-fuconate dehydratase	EC:4.2.1.68	Fructose and mannose metabolism	ko00051	deepkoala