Detailed information of ANN40482-RA in Montipora grisea

Genomic Location: Scaffold_5494__1_contigs__length_29253:9005...15644
NR annotation: MCG9132796.1, leucine-rich repeat domain-containing protein [Candidatus Poribacteria bacterium]
Species Montipora grisea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
No Swiss-Prot hit above the reporting threshold for this gene.
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0014565 (this species only) · gene tree & orthology
Ubiquitin familyUBD|Other|Beta-prp · all ubiquitin genes in this species

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00404
all species →		Dockerin_1Dockerin type I domainDomainInterproscan
PF13860
all species →		FlgD_igFlgD Ig-like domainDomainInterproscan
PF12799
all species →		LRR_4Leucine Rich repeats (2 copies)RepeatInterproscan
PF13516
all species →		LRR_6Leucine Rich repeatRepeatInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001611
all species →		RepeatLeucine-rich repeatInterproscan
IPR032675
all species →		Homologous_superfamilyLeucine-rich repeat domain superfamilyInterproscan
IPR006553
all species →		RepeatLeucine-rich repeat, cysteine-containing subtypeInterproscan
IPR016134
all species →		DomainDockerin domainInterproscan
IPR050836
all species →		FamilySDS22/Internalin LRR-containingInterproscan
IPR013783
all species →		Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR002105
all species →		RepeatDockerin type I repeatInterproscan
IPR015943
all species →		Homologous_superfamilyWD40/YVTN repeat-like-containing domain superfamilyInterproscan
IPR025965
all species →		DomainFlgD/Vpr, Ig-like domainInterproscan
IPR011044
all species →		Homologous_superfamilyQuinoprotein amine dehydrogenase, beta chain-likeInterproscan
IPR008964
all species →		Homologous_superfamilyInvasin/intimin cell-adhesion fragmentsInterproscan
IPR003591
all species →		RepeatLeucine-rich repeat, typical subtypeInterproscan
IPR018247
all species →		Binding_siteEF-Hand 1, calcium-binding siteInterproscan
IPR036439
all species →		Homologous_superfamilyDockerin domain superfamilyInterproscan
IPR026444
all species →		DomainSecretion system C-terminal sorting domainInterproscan
IPR025875
all species →		RepeatLeucine rich repeat 4Interproscan
IPR001680
all species →		RepeatWD40 repeatInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46652
all species →		LEUCINE-RICH REPEAT AND IQ DOMAIN-CONTAINING PROTEIN 1-RELATEDInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0005515
all species →		Molecular Functionprotein bindingInterproscan
GO:0000272
all species →		Biological Processpolysaccharide catabolic processInterproscan
GO:0004553
all species →		Molecular Functionhydrolase activity, hydrolyzing O-glycosyl compoundsInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN40482-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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