Gene detail

Detailed information of ANN40528-RA in Montipora grisea

Genomic Location: Scaffold_4540__1_contigs__length_31930:22673...25179
NR annotation: MCI5045070.1, glutamine--fructose-6-phosphate transaminase (isomerizing) [Aquisalinus sp.]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN40528-RA

ATGGGAGTCGATTCACGTCTCAGCCTCTCAGAAGCGGAGGCTGTTTTTCAGGAACGCCGACGGGAAGAGATGATGCTGGCAGGCGTCACGTTGAGTGATCCGGAAACGGTCTATTTTTCTTATGACACCGAGATTGCTGAGGACGTTACTGTTGGACAAAACGTTGTATTCGGATCAGGTGTTACGGTGGAGAGCGGTGCCGAGATCAAGGCTTTTTCTCATCTTGAAGGCGTGCATGTGAAATCCGGTGCTGCGATTGGTCCGTTTGCCCGCCTGCGGCCCGGTACAGTGGTCGGGGAAGATGCCAAGATTGGCAATTTTGTCGAAACGAAAAAAGCGGAACTTGGATCTGGTGCAAAGGTCAGTCATCTGAGTTATATTGGAGATGCGGTTGTTGGTGCCGAAGCCAATATCGGAGCTGGCACCATCACTTGTAACTATGATGGTTACAAGAAGTATCAGACTGTTATCGGTGATGGTGCTTTTGTTGGCTCCAATTCCTCTCTGGTGGCACCTGTGGTTATTGGAGACGGCGCCTATGTCGGCTCCGGCTCGGTGGTCACGAAGGATGTTGAAAAAGACGCATTAGCGGTGGCTCGCGGTAAGCAGATGCAGAAATCTGGCTGGCTTTGGGTTTCCGCAAGAAAATGTCGTAAACTGAGTTCTGGCAAGGAGTATTCTCATGTGCGGTTTGTACGTCTTGAATACCGCGGCTATGATTCTGCTGGCATTGCCACTTTTATTGACGGGAAGATTGAGCGACGGCGTGCCGTAGGGAAACTTTCTGCTTTGCGCGAGGTTCTCGTTAAGAAGCCCCTGGCCGGGGGCGTCGGTATTGGTCACACAAGATGGGCAACACATGGTGCACCAACGGTAACCAATGCGCATCCGCATACAACGGATGAAGTAGCTGTTGTCCATAATGGTATTATCGAGAATTTTGCTGATCTGCGTGATGAACTGGGGCAGGCAGGGCGGACATTTGAGACCGAGACAGATACCGAGACCATTGCCCATCTTGTCAGTCATTATCTGACTGCCGGTGAAGGCCCGGACACAGCGTTCGCCAAAGCGGTCTCACGTCTTGAAGGGGCGTTTGCTATTGCCGTGATGATCCGGGATCATCCGGACAAGGTCTACATTGCCCGGATGGGCAGTCCGCTGGCGGTCGGGCGTGGTGATGGAGAGATGTTCCTGGGGTCAGACGCTTATGCACTGGCGCCGTTTACCAGTCGTGTGACCTATCTGATGGACGGAGACTGGGGCATTCTGGCGCGCGACGGAGTGCAACTGTTTGATGCGGCGGGAAAACCTGTTCAGCGGGCAGAGCAGGTGTCTGATGCCGCCGCTACAATGGTTGACAAGGGCGGGCACCGGCACTTCATGGCCAAGGAAATTCATGAGCAGCCTGAGGTGGTTGGTCATACGCTTGCAGCATATGTTGACCCGATCCGCCGGGAGGTACGTTTACCTGAGGGACTGAACTTTGAAGCAGTTTCCCGACTGACGATTTCGGCTTGTGGTACGGCGTATTATGCCGGTCTGATCGCCAAGTACTGGTTCGAGCATTGGGCGCATCTTTCTGTTGAAATAGATATTGCCTCCGAGCTGCGCTACCGACAGGTGCCGTATCCAGAGAACGGGATGGCGCTTTATATTTCCCAGTCGGGAGAAACTGCCGATACGCTGGCTGCCCTGCGCGACGCCAAAGCTGCCGGGCAGAGCATTGCCGCGTTGGTGAACGTGCCGGAATCAACGATTGCACGGGAAGCGGATATTCTGCTGCCGACACATGCCGGGCCGGAGATCGGTGTGGCTTCGACCAAGGCTTTTACCTGCCAGCTGGCCGCCTTGGCGGCAATTGCTATCGGGGCGGGCCGGCAACGCGGGGTTCTGGATGAGGCACAGGAAGCAGCATTGGTGGACAGTCTGCTTGAAACTCCCCGGCACATTTCCGATGCGCTTGGTCGGGCCGGCGAGATCGAACGTTTGACGCAAGAACTCGCGAAGGCGCGAGACGTGCTTTATCTCGGGCGCGGCGTCAGTTTTCCGCTAGCCATGGAAGGTGCCCTGAAGCTGAAGGAAATCTCCTATATCCATGCTGAAGGTTATGCCGCCGGCGAACTGAAGCACGGACCGATTGCATTGATTGACGAGAATGTGCCTGTGATCGTGGTGGCGCCGGAAGATGCCCTGTTTGAGAAAACGATTTCCAACATGCAGGAAGTAATGGCTCGTAGCGGCAAGTGCTTGCTGATTTCGTCAGGCAGCGGGATAGCTGAGGCGGCCCGGGGCGGTGTGCTGTGGGGGACTCTGTCAGCGCCTGAAACCGAGCCTTTGATGGCGCCGCTGGTTTATGCTGTACCGATCCAGTTGCTGGCCTACTACACAGCAGTCGCCAAAGGGACGGATGTGGATCAACCCCGCAATCTCGCCAAGTCCGTGACAGTTGAATAA

Transcript

ANN40528-RA

Protein

Uniprot

Uniprot term	Description
Q98LX5	Glutamine--fructose-6-phosphate aminotransferase [isomerizing] OS=Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099) OX=266835 GN=glmS PE=3 SV=3
Q92PS4	Glutamine--fructose-6-phosphate aminotransferase [isomerizing] OS=Rhizobium meliloti (strain 1021) OX=266834 GN=glmS PE=3 SV=3
Q92ZK3	Glutamine--fructose-6-phosphate aminotransferase [isomerizing] OS=Rhizobium meliloti (strain 1021) OX=266834 GN=nodM PE=3 SV=3

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00132	Hexapep	Bacterial transferase hexapeptide (six repeats)	Repeat	Interproscan
PF01380	SIS	SIS domain	Domain	Interproscan
PF13522	GATase_6	Glutamine amidotransferase domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR029055	Homologous_superfamily	Nucleophile aminohydrolases, N-terminal	Interproscan
IPR035490	Domain	GlmS/FrlB, SIS domain 2	Interproscan
IPR001451	Repeat	Hexapeptide repeat	Interproscan
IPR011004	Homologous_superfamily	Trimeric LpxA-like superfamily	Interproscan
IPR038009	Domain	GlmU, C-terminal LbH domain	Interproscan
IPR017932	Domain	Glutamine amidotransferase type 2 domain	Interproscan
IPR001347	Domain	SIS domain	Interproscan
IPR005855	Family	Glucosamine-fructose-6-phosphate aminotransferase, isomerising	Interproscan
IPR047084	Domain	Glucosamine-fructose-6-phosphate aminotransferase, isomerising, N-terminal domain	Interproscan
IPR046348	Homologous_superfamily	SIS domain superfamily	Interproscan
IPR035466	Domain	GlmS/AgaS, SIS domain 1	Interproscan
IPR018357	Conserved_site	Hexapeptide transferase, conserved site	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10937	GLUCOSAMINE--FRUCTOSE-6-PHOSPHATE AMINOTRANSFERASE, ISOMERIZING	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0004360	Molecular Function	glutamine-fructose-6-phosphate transaminase (isomerizing) activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0006002	Biological Process	fructose 6-phosphate metabolic process	Interproscan
GO:0006047	Biological Process	UDP-N-acetylglucosamine metabolic process	Interproscan
GO:0006487	Biological Process	protein N-linked glycosylation	Interproscan
GO:0003977	Molecular Function	UDP-N-acetylglucosamine diphosphorylase activity	Interproscan
GO:0006048	Biological Process	UDP-N-acetylglucosamine biosynthetic process	Interproscan
GO:0019134	Molecular Function	glucosamine-1-phosphate N-acetyltransferase activity	Interproscan
GO:0097367	Molecular Function	carbohydrate derivative binding	Interproscan
GO:1901135	Biological Process	carbohydrate derivative metabolic process	Interproscan
GO:1901137	Biological Process	carbohydrate derivative biosynthetic process	Interproscan
GO:0016740	Molecular Function	transferase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K00820	glmS, GFPT; glutamine---fructose-6-phosphate transaminase (isomerizing)	EC:2.6.1.16	Peptidases and inhibitors	ko01002	deepkoala