Gene detail

Detailed information of ANN40588-RA in Montipora grisea

Genomic Location: Scaffold_7017__1_contigs__length_25822:19869...21027
NR annotation: NNJ74728.1, gamma-butyrobetaine dioxygenase [Anderseniella sp.]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
A0A4V8H042	[2-(trimethylamino)ethyl]phosphonate dioxygenase OS=Leisingera caerulea OX=506591 GN=tmpA PE=1 SV=1
Q98KK0	Probable gamma-butyrobetaine dioxygenase OS=Mesorhizobium japonicum (strain LMG 29417 / CECT 9101 / MAFF 303099) OX=266835 GN=mll1440 PE=3 SV=1
P80193	Gamma-butyrobetaine dioxygenase OS=Pseudomonas sp. (strain AK-1) OX=29440 PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02668	TauD	Taurine catabolism dioxygenase TauD, TfdA family	Domain	Interproscan
PF06155	GBBH-like_N	Gamma-butyrobetaine hydroxylase-like, N-terminal	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR042098	Homologous_superfamily	Taurine dioxygenase TauD-like superfamily	Interproscan
IPR003819	Domain	TauD/TfdA-like domain	Interproscan
IPR038492	Homologous_superfamily	GBBH-like, N-terminal domain superfamily	Interproscan
IPR010376	Domain	Gamma-butyrobetaine hydroxylase-like, N-terminal	Interproscan
IPR050411	Family	Alpha-ketoglutarate-dependent hydroxylases	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR10696	GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0045329	Biological Process	carnitine biosynthetic process	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K24291	tmpA; [2-(trimethylamino)ethyl]phosphonate dioxygenase	EC:1.14.11.72	Enzymes with EC numbers	-	deepkoala