Detailed information of ANN40835-RA in Montipora grisea

Genomic Location: Scaffold_2578__1_contigs__length_41663:16303...17271
NR annotation: GJL89156.1, pseudouridine synthase [Minwuia thermotolerans]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P50513Ribosomal large subunit pseudouridine synthase D OS=Zymomonas mobilis subsp. mobilis (strain ATCC 31821 / ZM4 / CP4) OX=264203 GN=rluD PE=3 SV=2
Q45480Uncharacterized RNA pseudouridine synthase YlyB OS=Bacillus subtilis (strain 168) OX=224308 GN=ylyB PE=3 SV=3
P74346Uncharacterized RNA pseudouridine synthase slr1629 OS=Synechocystis sp. (strain ATCC 27184 / PCC 6803 / Kazusa) OX=1111708 GN=slr1629 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00849PseudoU_synth_2RNA pseudouridylate synthaseFamilyInterproscan
PF01479S4S4 domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR050188FamilyRluA Pseudouridine SynthaseInterproscan
IPR002942DomainRNA-binding S4 domainInterproscan
IPR006225FamilyPseudouridine synthase, RluC/RluDInterproscan
IPR006145DomainPseudouridine synthase, RsuA/RluA-likeInterproscan
IPR036986Homologous_superfamilyRNA-binding S4 domain superfamilyInterproscan
IPR006224Conserved_sitePseudouridine synthase, RluA-like, conserved siteInterproscan
IPR020103Homologous_superfamilyPseudouridine synthase, catalytic domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21600MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0001522Biological Processpseudouridine synthesisInterproscan
GO:0009451Biological ProcessRNA modificationInterproscan
GO:0009982Molecular Functionpseudouridine synthase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06180rluD; 23S rRNA pseudouridine1911/1915/1917 synthaseEC:5.4.99.23
Ribosome biogenesisko03009deepkoala

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