Detailed information of ANN40842-RA in Montipora grisea

Genomic Location: Scaffold_6521__1_contigs__length_26831:11903...12877
NR annotation: MCH2057751.1, 23S rRNA pseudouridine(1911/1915/1917) synthase RluD [Thalassotalea sp.]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P65834Ribosomal large subunit pseudouridine synthase D OS=Escherichia coli O6:H1 (strain CFT073 / ATCC 700928 / UPEC) OX=199310 GN=rluD PE=3 SV=2
P65835Ribosomal large subunit pseudouridine synthase D OS=Shigella flexneri OX=623 GN=rluD PE=3 SV=2
P33643Ribosomal large subunit pseudouridine synthase D OS=Escherichia coli (strain K12) OX=83333 GN=rluD PE=1 SV=4

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF01479S4S4 domainDomainInterproscan
PF00849PseudoU_synth_2RNA pseudouridylate synthaseFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036986Homologous_superfamilyRNA-binding S4 domain superfamilyInterproscan
IPR002942DomainRNA-binding S4 domainInterproscan
IPR020103Homologous_superfamilyPseudouridine synthase, catalytic domain superfamilyInterproscan
IPR050188FamilyRluA Pseudouridine SynthaseInterproscan
IPR006224Conserved_sitePseudouridine synthase, RluA-like, conserved siteInterproscan
IPR006145DomainPseudouridine synthase, RsuA/RluA-likeInterproscan
IPR006225FamilyPseudouridine synthase, RluC/RluDInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21600MITOCHONDRIAL RNA PSEUDOURIDINE SYNTHASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0001522Biological Processpseudouridine synthesisInterproscan
GO:0009451Biological ProcessRNA modificationInterproscan
GO:0009982Molecular Functionpseudouridine synthase activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06180rluD; 23S rRNA pseudouridine1911/1915/1917 synthaseEC:5.4.99.23
Ribosome biogenesisko03009deepkoala

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