Gene detail

Detailed information of ANN40892-RA in Montipora grisea

Genomic Location: Scaffold_6998__1_contigs__length_25848:11029...12252
NR annotation: WP_170763617.1, 5-aminolevulinate synthase [Ruegeria lacuscaerulensis]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
P26505	5-aminolevulinate synthase OS=Rhizobium radiobacter OX=358 GN=hemA PE=3 SV=1
P08080	5-aminolevulinate synthase OS=Rhizobium meliloti (strain 1021) OX=266834 GN=hemA PE=3 SV=2
Q04512	5-aminolevulinate synthase 1 OS=Cereibacter sphaeroides (strain ATCC 17023 / DSM 158 / JCM 6121 / CCUG 31486 / LMG 2827 / NBRC 12203 / NCIMB 8253 / ATH 2.4.1.) OX=272943 GN=hemA PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0004241 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00155 all species →	Aminotran_1_2	Aminotransferase class I and II	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR015422 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, small domain	Interproscan
IPR010961 all species →	Domain	Tetrapyrrole biosynthesis, 5-aminolevulinic acid synthase	Interproscan
IPR015421 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, major domain	Interproscan
IPR015424 all species →	Homologous_superfamily	Pyridoxal phosphate-dependent transferase	Interproscan
IPR001917 all species →	Binding_site	Aminotransferase, class-II, pyridoxal-phosphate binding site	Interproscan
IPR050087 all species →	Family	8-amino-7-oxononanoate synthase class-II	Interproscan
IPR004839 all species →	Domain	Aminotransferase, class I/classII	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR13693 all species →	CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0003870 all species →	Molecular Function	5-aminolevulinate synthase activity	Interproscan
GO:0030170 all species →	Molecular Function	pyridoxal phosphate binding	Interproscan
GO:0033014 all species →	Biological Process	tetrapyrrole biosynthetic process	Interproscan
GO:0016740 all species →	Molecular Function	transferase activity	Interproscan
GO:0005739 all species →	Cellular Component	mitochondrion	Interproscan
GO:0006783 all species →	Biological Process	heme biosynthetic process	Interproscan
GO:0009058 all species →	Biological Process	biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K00643	E2.3.1.37, ALAS; 5-aminolevulinate synthase	EC:2.3.1.37	Amino acid related enzymes	ko01007	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.