Gene detail

Detailed information of ANN40965-RA in Montipora grisea

Genomic Location: Scaffold_5072__1_contigs__length_30393:27907...29148
NR annotation: MBL9106736.1, sigma 54-interacting transcriptional regulator [Myxococcales bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
O87455	Regulatory protein LuxO OS=Vibrio cholerae serotype O1 (strain ATCC 39541 / Classical Ogawa 395 / O395) OX=345073 GN=luxO PE=1 SV=2
P09570	Nif-specific regulatory protein OS=Azotobacter vinelandii OX=354 GN=nifA PE=4 SV=1
P28614	Acetoin catabolism regulatory protein OS=Cupriavidus necator (strain ATCC 17699 / DSM 428 / KCTC 22496 / NCIMB 10442 / H16 / Stanier 337) OX=381666 GN=acoR PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00498	FHA	FHA domain	Family	Interproscan
PF00158	Sigma54_activat	Sigma-54 interaction domain	Domain	Interproscan
PF02954	HTH_8	Bacterial regulatory protein, Fis family	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR002078	Domain	RNA polymerase sigma factor 54 interaction domain	Interproscan
IPR002197	Domain	DNA binding HTH domain, Fis-type	Interproscan
IPR008984	Homologous_superfamily	SMAD/FHA domain superfamily	Interproscan
IPR000253	Domain	Forkhead-associated (FHA) domain	Interproscan
IPR003593	Domain	AAA+ ATPase domain	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR025662	Binding_site	Sigma-54 interaction domain, ATP-binding site 1	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR32071	TRANSCRIPTIONAL REGULATORY PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0008134	Molecular Function	transcription factor binding	Interproscan
GO:0043565	Molecular Function	sequence-specific DNA binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan