Gene detail

Detailed information of ANN41241-RA in Montipora grisea

Genomic Location: Scaffold_8379__1_contigs__length_22662:4583...6061
NR annotation: WP_167444991.1, ABC transporter ATP-binding protein [Thalassospira lucentensis]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
Q7NZU6	ATP-dependent lipid A-core flippase OS=Chromobacterium violaceum (strain ATCC 12472 / DSM 30191 / JCM 1249 / CCUG 213 / NBRC 12614 / NCIMB 9131 / NCTC 9757 / MK) OX=243365 GN=msbA PE=3 SV=1
P71082	Putative multidrug export ATP-binding/permease protein YgaD OS=Bacillus subtilis (strain 168) OX=224308 GN=ygaD PE=3 SV=2
Q2LVL0	ATP-dependent lipid A-core flippase OS=Syntrophus aciditrophicus (strain SB) OX=56780 GN=msbA PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00005	ABC_tran	ABC transporter	Domain	Interproscan
PF00664	ABC_membrane	ABC transporter transmembrane region	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR003593	Domain	AAA+ ATPase domain	Interproscan
IPR036640	Homologous_superfamily	ABC transporter type 1, transmembrane domain superfamily	Interproscan
IPR003439	Domain	ABC transporter-like, ATP-binding domain	Interproscan
IPR011527	Domain	ABC transporter type 1, transmembrane domain	Interproscan
IPR039421	Family	Type 1 protein exporter	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR24221	ATP-BINDING CASSETTE SUB-FAMILY B	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0055085	Biological Process	transmembrane transport	Interproscan
GO:0140359	Molecular Function	ABC-type transporter activity	Interproscan
GO:0034040	Molecular Function	ATPase-coupled lipid transmembrane transporter activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K14699	irtB, ybtQ; ATP-binding cassette, subfamily B, bacterial IrtB/YbtQ	EC:7.-.-.-	Transporters	ko02000	deepkoala