Detailed information of ANN41255-RA in Montipora grisea

Genomic Location: Scaffold_5956__1_contigs__length_28181:18018...20588
NR annotation: MXZ96294.1, polyribonucleotide nucleotidyltransferase [Acidimicrobiaceae bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q0RDT1Polyribonucleotide nucleotidyltransferase OS=Frankia alni (strain DSM 45986 / CECT 9034 / ACN14a) OX=326424 GN=pnp PE=3 SV=1
A8L6G1Polyribonucleotide nucleotidyltransferase OS=Parafrankia sp. (strain EAN1pec) OX=298653 GN=pnp PE=3 SV=1
Q2J735Polyribonucleotide nucleotidyltransferase OS=Frankia casuarinae (strain DSM 45818 / CECT 9043 / HFP020203 / CcI3) OX=106370 GN=pnp PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00575S1S1 RNA binding domainDomainInterproscan
PF01138RNase_PH3' exoribonuclease family, domain 1DomainInterproscan
PF00013KH_1KH domainDomainInterproscan
PF03726PNPasePolyribonucleotide nucleotidyltransferase, RNA binding domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003029DomainS1 domainInterproscan
IPR027408Homologous_superfamilyPNPase/RNase PH domain superfamilyInterproscan
IPR012162FamilyPolyribonucleotide nucleotidyltransferaseInterproscan
IPR036345Homologous_superfamilyExoribonuclease, PH domain 2 superfamilyInterproscan
IPR036612Homologous_superfamilyK Homology domain, type 1 superfamilyInterproscan
IPR001247DomainExoribonuclease, phosphorolytic domain 1Interproscan
IPR012340Homologous_superfamilyNucleic acid-binding, OB-foldInterproscan
IPR004087DomainK Homology domainInterproscan
IPR020568Homologous_superfamilyRibosomal protein uS5 domain 2-type superfamilyInterproscan
IPR004088DomainK Homology domain, type 1Interproscan
IPR036456Homologous_superfamilyPolyribonucleotide nucleotidyltransferase, RNA-binding domain superfamilyInterproscan
IPR015848DomainPolyribonucleotide nucleotidyltransferase, RNA-binding domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11252POLYRIBONUCLEOTIDE NUCLEOTIDYLTRANSFERASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0000175Molecular Function3'-5'-RNA exonuclease activityInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0004654Molecular Functionpolyribonucleotide nucleotidyltransferase activityInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006401Biological ProcessRNA catabolic processInterproscan
GO:0006402Biological ProcessmRNA catabolic processInterproscan
GO:0006396Biological ProcessRNA processingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K00962pnp, PNPT1; polyribonucleotide nucleotidyltransferaseEC:2.7.7.8
Transfer RNA biogenesisko03016deepkoala

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