Gene detail

Detailed information of ANN41292-RA in Montipora grisea

Genomic Location: Scaffold_4309__1_contigs__length_32710:26582...28735
NR annotation: MXV76889.1, WD40 repeat domain-containing protein [Candidatus Poribacteria bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

ANN41292-RA

ATGGGTTTACCTGAAGGTGCTATTGCCCGTTTCAGCAAGGGCTATATAGTAGATATGATGTATTCGCCGGATGGCACGCGGCTTGCTGTCACGACTACCATTGGTGTTTGGTTATATAATGCAAAAACGGGAGAGGAACTTGACCTAATAACAGGAGGACATACTGATAGCGTCTATTCTGCTGCATATTCTCCAGATGGTAAGACTATCGCAACGGGTAGTTGGGATAGAACAATACGGTTGTGGGACACACGTACAGGAAAAAATATAAAAACTTTCAAAGGATATACCTACGGAATAGGTTTAGTCGCATATTCCCCGGATGGTAAAACAATCGCAATCCGCAATGGTAGAAAGTCTACTATAGAACTATTGAATGCACGCACAGGAAAACACCTAAAGACACTTACTGGACATGAAAAGCCTAACGCCTTATACGAAGGACATGGAGACGTGTCTATCACCTCATTTGTGTATTCACCAGATGGCAAAACAATCGTCAGTGGTGGCGGGGACAAAACAGTTCGATTGTGGAATGCACGCACAGGAGGAAACATACAAACACTTACAGGACATACAGAAGCGGTCCGTGCTGTTGCATATTCGCCGGATGGTGGGACTATTGTAAGTGCAAGCAGGGATAAGACGGTACGAATGTGGGATGCACAAACTGGTGAAAACATAAAAACACTTACAGGTCATAATGACATTATCGTTTCTGTTGCTTACTCGCCGGATGGGAGTACCATCATATCTGCTGGTTGGGATGGCATGTTGCATCGGTGGGACGCACAAACTGGAAAACCTTTAAAGACTTATGAAATATACACGGGTGTTCTCTATTTCGCACGGGGACATGGGGGTGCCATCACACACACTGCGTATTCACCGGATGGAGAAACAATCGCTACCGCTGGTGCGGATGGAAAAATGCAGTGGTGGGATGCACACACTGGAGAAAACATAAAAACATTCACAGAATATGTAAGTGGTTCTCGGACCATAACTTACTCGCCTGATAAGAAGAAAATCGCAGTTACTGCAGGAGGAAAGGTAAATCTATGGAATGCATCAGGGAAGCACTTAAAAACCCTAACAGGACATAAAGGATATGTTGCGGGAATAACGTTTTCTCCTGATGGAGATATACTTGTTACTGGAAGTTCTGATAGGACAGCGCGCTTATGGAATGTACACACAGGTGAAAATATTGAAATACTTACCGGACATACTGGGATTGTCTATAACGCTATATTTTCCGCAGATGGTGATAACTTCATAACTCGCGGTGGCAATAACTTGCGGATGTGGAGTGCAAACACAAGAGAACACCTCAAAACATTCGAAGGAGATGTGTACGGTTGTAGATGGTTTAAGTATTCGCCGGATGGAAAAATAATAGCAACTCGCTTTAATGATACGGTGCGGTTGTTAGATACACATACAAGAGAAACGAAAAATGTACTCATTGGTCATACGGGTCGTATTATTACTGCTGTGTTTTCTCCGAATGGTGATACGGTTGCAACTTTTGCTAAAGATAATACCTTCCGTTTGTGGAATCCACACACAGGTAAAAATATCAAAACACTCCACATAACAGGAACACCTATTACTGTTATATATCCCTCGGATAGCGATCCGATCGCAATTTCTGTCAATAAAGAAGCAGTGACGCTTTCGAATGTTGTAACTGGACAACATCTAAAAACATTAGAATCGTCGGGACGTCCTTTCTTTGGAATGGGGCAATCCAAAAAATCCTTTGGTCCGCCTCCCTACCATATCCGAACCGTTAGGCATTCACCGAATGGAGAAACGCTCGCAACTGTCAGATACAATGAAACGGCGCAAATGTGGAATGTCAACACAGGAAAGCGCATAGGAAAACTGATAAAACCTCTCAAAGACGATCCATCGGAAGGAGACACTTGGGTTGAGTACTCTCCAGATGGCAATATACTCGCAACAACGCAAATTGGAAATTTGGGTGGCACGGTGCGGTTGTGGGATGCTGCCACAGGTAAACACCTGAAAACACTCAAAGGGCATACCTATTGTGGAAATTCATTTGAATTTTCGTCCGATAGCAAAACAATCATAACAGGACATTATGATGGCACGCTCATACTATGGGACATACCCCCGCGGTAA

Transcript

ANN41292-RA

Protein

Uniprot

Gene family

Uniprot term	Description
A1DP19	Nuclear distribution protein nudF OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / CBS 544.65 / FGSC A1164 / JCM 1740 / NRRL 181 / WB 181) OX=331117 GN=nudF PE=3 SV=1
B0XM00	Nuclear distribution protein nudF OS=Aspergillus fumigatus (strain CBS 144.89 / FGSC A1163 / CEA10) OX=451804 GN=nudF PE=3 SV=1
Q4WLM7	Nuclear distribution protein nudF OS=Aspergillus fumigatus (strain ATCC MYA-4609 / CBS 101355 / FGSC A1100 / Af293) OX=330879 GN=nudF PE=3 SV=1

Gene family	Subfamily
Ubiquitin Family	UBD\|Other\|Beta-prp
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|CDC20
Ubiquitin Family	E3\|E3 adaptor Cullin RING\|DWD

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00400	WD40	WD domain, G-beta repeat	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR001680	Repeat	WD40 repeat	Interproscan
IPR019775	Conserved_site	WD40 repeat, conserved site	Interproscan
IPR015943	Homologous_superfamily	WD40/YVTN repeat-like-containing domain superfamily	Interproscan
IPR018391	Repeat	Pyrrolo-quinoline quinone beta-propeller repeat	Interproscan
IPR036322	Homologous_superfamily	WD40-repeat-containing domain superfamily	Interproscan
IPR020472	Repeat	G-protein beta WD-40 repeat	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR19848	WD40 REPEAT PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan