Detailed information of ANN41301-RA in Montipora grisea

Genomic Location: Scaffold_8482__1_contigs__length_22418:7883...9469
NR annotation: MBZ0261148.1, choline dehydrogenase [Hyphomicrobiales bacterium]
Species Montipora grisea · all data for this species · gene families


 Gene Structure
More details in JBrowse  Sequence
CDS
Transcript
Protein
 UniProt (Swiss-Prot top hit)
UniProt accessionDescription
B2JS89Oxygen-dependent choline dehydrogenase OS=Paraburkholderia phymatum (strain DSM 17167 / CIP 108236 / LMG 21445 / STM815) OX=391038 GN=betA PE=3 SV=1
C6DKY4Oxygen-dependent choline dehydrogenase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) OX=561230 GN=betA PE=3 SV=1
Q48CM7Oxygen-dependent choline dehydrogenase OS=Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6) OX=264730 GN=betA PE=3 SV=1
 Gene family
Family typeMembership / link
Orthogroup (gene family)OG0001469 (this species only)

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05199
all species →		GMC_oxred_CGMC oxidoreductaseDomainInterproscan
PF00732
all species →		GMC_oxred_NGMC oxidoreductaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012132
all species →		FamilyGlucose-methanol-choline oxidoreductaseInterproscan
IPR000172
all species →		DomainGlucose-methanol-choline oxidoreductase, N-terminalInterproscan
IPR036188
all species →		Homologous_superfamilyFAD/NAD(P)-binding domain superfamilyInterproscan
IPR007867
all species →		DomainGlucose-methanol-choline oxidoreductase, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR11552
all species →		GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASEInterproscan

 Gene Ontology
GO termCategoryDescriptionSource
GO:0050660
all species →		Molecular Functionflavin adenine dinucleotide bindingInterproscan
GO:0008812
all species →		Molecular Functioncholine dehydrogenase activityInterproscan
GO:0016020
all species →		Cellular ComponentmembraneInterproscan
GO:0016491
all species →		Molecular Functionoxidoreductase activityInterproscan
GO:0019285
all species →		Biological Processglycine betaine biosynthetic process from cholineInterproscan
GO:0016614
all species →		Molecular Functionoxidoreductase activity, acting on CH-OH group of donorsInterproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.
 KEGG pathway
No KEGG orthology assignment for ANN41301-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.
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