Gene detail

Detailed information of ANN41301-RA in Montipora grisea

Genomic Location: Scaffold_8482__1_contigs__length_22418:7883...9469
NR annotation: MBZ0261148.1, choline dehydrogenase [Hyphomicrobiales bacterium]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
B2JS89	Oxygen-dependent choline dehydrogenase OS=Paraburkholderia phymatum (strain DSM 17167 / CIP 108236 / LMG 21445 / STM815) OX=391038 GN=betA PE=3 SV=1
C6DKY4	Oxygen-dependent choline dehydrogenase OS=Pectobacterium carotovorum subsp. carotovorum (strain PC1) OX=561230 GN=betA PE=3 SV=1
Q48CM7	Oxygen-dependent choline dehydrogenase OS=Pseudomonas savastanoi pv. phaseolicola (strain 1448A / Race 6) OX=264730 GN=betA PE=3 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF05199	GMC_oxred_C	GMC oxidoreductase	Domain	Interproscan
PF00732	GMC_oxred_N	GMC oxidoreductase	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR012132	Family	Glucose-methanol-choline oxidoreductase	Interproscan
IPR000172	Domain	Glucose-methanol-choline oxidoreductase, N-terminal	Interproscan
IPR036188	Homologous_superfamily	FAD/NAD(P)-binding domain superfamily	Interproscan
IPR007867	Domain	Glucose-methanol-choline oxidoreductase, C-terminal	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11552	GLUCOSE-METHANOL-CHOLINE GMC OXIDOREDUCTASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0050660	Molecular Function	flavin adenine dinucleotide binding	Interproscan
GO:0008812	Molecular Function	choline dehydrogenase activity	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0016491	Molecular Function	oxidoreductase activity	Interproscan
GO:0019285	Biological Process	glycine betaine biosynthetic process from choline	Interproscan
GO:0016614	Molecular Function	oxidoreductase activity, acting on CH-OH group of donors	Interproscan