Detailed information of ANN41446-RA in Montipora grisea

Genomic Location: Scaffold_5645__1_contigs__length_28916:15594...17000
NR annotation: CAG0943704.1, Transcriptional regulatory protein QseF [Candidatus Brocadiaceae bacterium]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P0AFU4Transcriptional regulatory protein GlrR OS=Escherichia coli (strain K12) OX=83333 GN=glrR PE=1 SV=1
P0AFU5Transcriptional regulatory protein QseF OS=Escherichia coli O157:H7 OX=83334 GN=qseF PE=1 SV=1
Q06065Regulatory protein AtoC OS=Escherichia coli (strain K12) OX=83333 GN=atoC PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02954HTH_8Bacterial regulatory protein, Fis familyDomainInterproscan
PF00158Sigma54_activatSigma-54 interaction domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR001789DomainSignal transduction response regulator, receiver domainInterproscan
IPR002078DomainRNA polymerase sigma factor 54 interaction domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR002197DomainDNA binding HTH domain, Fis-typeInterproscan
IPR003593DomainAAA+ ATPase domainInterproscan
IPR025943Binding_siteSigma-54 interaction domain, ATP-binding site 2Interproscan
IPR011006Homologous_superfamilyCheY-like superfamilyInterproscan
IPR025944Conserved_siteSigma-54 interaction domain, conserved siteInterproscan
IPR009057Homologous_superfamilyHomeobox-like domain superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR32071TRANSCRIPTIONAL REGULATORY PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000160Biological Processphosphorelay signal transduction systemInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0008134Molecular Functiontranscription factor bindingInterproscan
GO:0043565Molecular Functionsequence-specific DNA bindingInterproscan
GO:0016887Molecular FunctionATP hydrolysis activityInterproscan

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