Gene detail

Detailed information of ANN41575-RA in Montipora grisea

Genomic Location: Scaffold_8684__1_contigs__length_21879:6610...8313
NR annotation: TPD60788.1, AAA family ATPase [Emcibacter nanhaiensis]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q43965	Phenol regulator MopR OS=Acinetobacter guillouiae OX=106649 GN=mopR PE=1 SV=1
P06519	Transcriptional regulatory protein XylR OS=Pseudomonas putida OX=303 GN=xylR PE=4 SV=1
P71229	DNA-binding transcriptional activator HyfR OS=Escherichia coli (strain K12) OX=83333 GN=hyfR PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02954	HTH_8	Bacterial regulatory protein, Fis family	Domain	Interproscan
PF06505	XylR_N	Activator of aromatic catabolism	Family	Interproscan
PF00158	Sigma54_activat	Sigma-54 interaction domain	Domain	Interproscan
PF02830	V4R	V4R domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR025944	Conserved_site	Sigma-54 interaction domain, conserved site	Interproscan
IPR025662	Binding_site	Sigma-54 interaction domain, ATP-binding site 1	Interproscan
IPR024096	Homologous_superfamily	NO signalling/Golgi transport ligand-binding domain superfamily	Interproscan
IPR002197	Domain	DNA binding HTH domain, Fis-type	Interproscan
IPR004096	Domain	4-vinyl reductase, 4VR	Interproscan
IPR010523	Domain	Activator of aromatic catabolism	Interproscan
IPR002078	Domain	RNA polymerase sigma factor 54 interaction domain	Interproscan
IPR009057	Homologous_superfamily	Homeobox-like domain superfamily	Interproscan
IPR003593	Domain	AAA+ ATPase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR32071	TRANSCRIPTIONAL REGULATORY PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0043565	Molecular Function	sequence-specific DNA binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0006355	Biological Process	regulation of DNA-templated transcription	Interproscan
GO:0008134	Molecular Function	transcription factor binding	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan