Gene detail

Detailed information of ANN41627-RA in Montipora grisea

Genomic Location: Scaffold_5301__1_contigs__length_29745:12252...13331
NR annotation: MBT8076990.1, allantoicase [Gammaproteobacteria bacterium]
Species abbreviation MGRIS · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8XUB7	Probable allantoicase OS=Ralstonia nicotianae (strain ATCC BAA-1114 / GMI1000) OX=267608 GN=alc PE=3 SV=1
Q62JH0	Probable allantoicase 1 OS=Burkholderia mallei (strain ATCC 23344) OX=243160 GN=alc1 PE=3 SV=1
Q63T53	Probable allantoicase 1 OS=Burkholderia pseudomallei (strain K96243) OX=272560 GN=alc1 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0005473 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF03561 all species →	Allantoicase	Allantoicase repeat	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR005164 all species →	Family	Allantoicase	Interproscan
IPR008979 all species →	Homologous_superfamily	Galactose-binding-like domain superfamily	Interproscan
IPR015908 all species →	Domain	Allantoicase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR12045 all species →	ALLANTOICASE	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000256 all species →	Biological Process	allantoin catabolic process	Interproscan
GO:0004037 all species →	Molecular Function	allantoicase activity	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K01477	alc, ALLC; allantoicase	EC:3.5.3.4	Purine metabolism	ko00230	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.