Gene detail

Detailed information of ANN41681-RA in Montipora grisea

Genomic Location: Scaffold_7867__1_contigs__length_23911:6592...8895
NR annotation: MXW65558.1, glucosamine-6-phosphate deaminase [Gemmatimonadales bacterium]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

ANN41681-RA

ATGAGCGGCACGGCCCACGCGCGGAGAGAGCGACTGCCGGTCCGCATCATGCCGGACCACGACAGCATCGCGGCCGAGGTCGCCGGGCGGATCGCGGCCCTGCTCCGGCAGCGGGCCGGCAACGGGCGCCACGCCGTTCTCGGCCTCGCCACGGGGTCCACCCCCCTGGGCGTGTACCGGGAACTCATCCGCCTGCACCGGAACGAGGGTCTCGACTTCTCCAACGCGGTCACCTTCAACCTCGACGAGTACTTCCCGATGCGGCCCGGCAGCTTCCACAGCTACCACCGCTACATGCGCGAGTACCTGTTCGACCACGTGAACATCCCCCCGGAACACTGCCAGGTCCCCCGCGGCGATGTGCCCGAGAAGGAGGTCGAGGCGCGCTGCGCCGACTACGAGCGCCGCATTCGCGAGGCGGGAGGGATCGATCTCCAGATCCTTGGAATCGGACGCAGCGGCCACGTCGGCTTCAACGAGCCGGGCTCCGAGCGCGATTCGCGCACCCGGCGTCTCTACCTGGACACCGTCACGCGGGCCGATGCCGCATCCGATTTCTTCGGCGAGGAGAACGTACCGCCGCAGGCGATCACCATGGGCGTGGCGACGATTCTCGAGGCGCGGGAAGTGGTTCTGCTCGCGACCGGCGAGCACAAGGCCGCGATCGTGCGCCGGGCCGTCGAAGGGGATGTCCATCCCGATGTCGCCGCGACCTTCCTCCAGCGGCATCCCGCCGTCACGGTCTATCTCGATCCGGCCGCCGCCTCCGAACTCACGCGCATCCGCGCGCCGTGGCGGGTGGGCGACGTGGAATGGACCCCGGAGCGGGAGACCGCCGCCGTCATCTGGCTCAGCGAGCGCACCGGAAAGTCGATCCTGCACCTCGCGACCGACGATTATCGCGCGAACCACCTCGCCCCGCTCACCTCCCGGCACGGGTCGGCCGAGCCGCTGAACGGACAGGTCTTCAACGCACTCATCTCCAAGATCCGGGGGAAGAGCCGGTTGCCCCGCGGCGAGAACATCGTCGTCTTTTCGCCCCATCCGGATGACGACGTGATTTCGATGGGCGGGCTGCTGAGGAAGCTCGTCGAAAACGGCAACCGGTTGACGGTGGCCTATCAGACCTCCGGGAACATCGCCGTCTTCGACCACGAGGTGCGGCGGTACGTGGATTTCCTCCGTCGAGCCGCGGGCGTGATCGATTTCGGGGACGCCGGGGACCTCGAGGGGGTGCTGCGATCCTTCGAAGACCGGCTCGCCCGCAAGGAGCCGGGGGACATCGACCCCGACGCGGTCCAGCAGCTGAAGCGGATCATCCGGGAGACCGAGGCGACCGCCGCCATCGAATCGCTTGGGCTCTCCGCCGACCGCGCCCGCTTTCTGAACCAGCCGTTCTATCGGACGGGAGAAGTGAGGAAGAACCCGATCACCGCGGCGGACGTGGAGATCGTGGCGCGGCTGCTGGAAGAGGTGCGGCCCACGATCGTGTTCGCGGCCGGAGACCTTTCCGATCCGCACGGCACGCACCGCATGTGCCTCGAGACGGTCGAAGCGGCGCTTGCCCGCTACGGAGGCGACCCGCCTTGGCTGTGGCTCTACCGCGGCGCGTGGCAGGAGTGGAGCCTCGACGAAGCGACGGTCCTCGTACCGCTCTCCGAAGGGGAGCTGCGGGGCAAGGTCCAGGCCATCTTCCGCCACGAATCGCAGAAGGATTCGGCCCCCTTCCCCGGTCCCGATCCGCGCGAATTCTGGCAGCGCGTGGTCGAACGAAACCGGGATACGGCCGACCGGCTCGCGCGGTATTACGCCATGGAGGCGTACGTGACGCTGCGGGACGGGGAGCGGGTCGAGGGGTCCGGAGATCCCGACCTCCTCCCTCGCGGACCCGGAGGCCTGAACCGGTGCCGCGCCCGGAGGGACGGTGGCGGGTGGCCGGCTGACATGGACCGGTTTCTTCGGCACGGAACGGGTTCCGTTCGATCTCTTCGGACCGGGGCATCTGGCGGCGATCGGCGTCCTGCTGGCGATCGGCGTCTGCGTGATCCGCGCCGGCCTCGGGGCCGACGAGCGCGGCCGGCGCCGTCTGAGGTTGGCGATGGGCTGCACGATTTTCCTTTTCCTCGCATCGAGGCATCTGTGGAAGGCGGGGACGGGGCTTTGGTCGGTGCAGAACGACATGCCGCTACACCTCTGCGGCGCCATGGCCTGGGTGACCATATGCGGACTTTGGACTCGGCATCCCCCGCGTTCTCCGCCTCATGTACTTCTTCGGCGTGGCGGGTGCGACGCAGGCGGTCCTGA

Transcript

ANN41681-RA

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
Q8AB53	Putative glucosamine-6-phosphate deaminase-like protein BT_0258 OS=Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / JCM 5827 / CCUG 10774 / NCTC 10582 / VPI-5482 / E50) OX=226186 GN=BT_0258 PE=3 SV=1
Q7UVM5	Glucosamine-6-phosphate deaminase OS=Rhodopirellula baltica (strain DSM 10527 / NCIMB 13988 / SH1) OX=243090 GN=nagB PE=3 SV=1
O31458	Glucosamine-6-phosphate deaminase 2 OS=Bacillus subtilis (strain 168) OX=224308 GN=gamA PE=2 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0006163 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF01182 all species →	Glucosamine_iso	Glucosamine-6-phosphate isomerases/6-phosphogluconolactonase	Domain	Interproscan
PF02585 all species →	PIG-L	GlcNAc-PI de-N-acetylase	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR037171 all species →	Homologous_superfamily	NagB/RpiA transferase-like	Interproscan
IPR024078 all species →	Homologous_superfamily	Putative deacetylase LmbE-like domain superfamily	Interproscan
IPR052960 all species →	Family	Glucosamine-6-phosphate deaminase-like	Interproscan
IPR004547 all species →	Family	Glucosamine-6-phosphate isomerase	Interproscan
IPR006148 all species →	Domain	Glucosamine/galactosamine-6-phosphate isomerase	Interproscan
IPR003737 all species →	Family	N-acetylglucosaminyl phosphatidylinositol deacetylase-related	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR42892 all species →	GLUCOSAMINE-6-PHOSPHATE DEAMINASE-LIKE PROTEIN BT_0258-RELATED	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0004342 all species →	Molecular Function	glucosamine-6-phosphate deaminase activity	Interproscan
GO:0006044 all species →	Biological Process	N-acetylglucosamine metabolic process	Interproscan
GO:0005975 all species →	Biological Process	carbohydrate metabolic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

KO	Enzyme	Enzyme ID	Pathway	Map ID	Source
K02564	nagB, GNPDA; glucosamine-6-phosphate deaminase	EC:3.5.99.6	Amino sugar and nucleotide sugar metabolism	ko00520	deepkoala

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.