Gene detail

Detailed information of ANN41890-RA in Montipora grisea

Genomic Location: Scaffold_8437__1_contigs__length_22523:10834...11787
NR annotation: WP_127901461.1, pyridoxal-phosphate dependent enzyme [Solirhodobacter olei]
Species Montipora grisea · all data for this species · gene families

Gene Structure

More details in JBrowse

Sequence

CDS

Transcript

Protein

UniProt (Swiss-Prot top hit)

UniProt accession	Description
A1B8Z2	beta-hydroxyaspartate dehydratase OS=Paracoccus denitrificans (strain Pd 1222) OX=318586 GN=bhcB PE=1 SV=1
Q2PGG3	Serine racemase OS=Arabidopsis thaliana OX=3702 GN=SR PE=1 SV=1
A2XWA9	Serine racemase OS=Oryza sativa subsp. indica OX=39946 GN=OsI_16936 PE=3 SV=1

Gene family

Family type	Membership / link
Orthogroup (gene family)	OG0002523 (this species only)

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00291 all species →	PALP	Pyridoxal-phosphate dependent enzyme	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR036052 all species →	Homologous_superfamily	Tryptophan synthase beta chain-like, PALP domain superfamily	Interproscan
IPR001926 all species →	Domain	Tryptophan synthase beta chain-like, PALP domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR43050 all species →	SERINE / THREONINE RACEMASE FAMILY MEMBER	Interproscan

Gene Ontology

GO term	Category	Description	Source
GO:0000287 all species →	Molecular Function	magnesium ion binding	Interproscan
GO:0003941 all species →	Molecular Function	L-serine ammonia-lyase activity	Interproscan
GO:0005524 all species →	Molecular Function	ATP binding	Interproscan
GO:0018114 all species →	Molecular Function	threonine racemase activity	Interproscan
GO:0030170 all species →	Molecular Function	pyridoxal phosphate binding	Interproscan
GO:0030378 all species →	Molecular Function	serine racemase activity	Interproscan
GO:0070179 all species →	Biological Process	D-serine biosynthetic process	Interproscan

Search by domain instead of by gene. Any accession above (InterPro, Pfam, PANTHER, GO, KEGG) can be used as a query on the Functional Domain Search page, which searches all 148 annotated genomes at once.

KEGG pathway

No KEGG orthology assignment for ANN41890-RA.

Searching by KO or pathway ID across all species is available on the KEGG Pathway page.