Detailed information of Aala_g1012.t1 in Alatina alata

Genomic Location: :...
NR annotation: CRX73254.1, Contactin 4, partial [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
B8VIW9Fibronectin type III domain-containing protein OS=Acropora millepora OX=45264 PE=1 SV=1
Q7YR37ATP-binding cassette sub-family F member 1 OS=Pan troglodytes OX=9598 GN=ABCF1 PE=3 SV=1
Q767L0ATP-binding cassette sub-family F member 1 OS=Sus scrofa OX=9823 GN=ABCF1 PE=3 SV=1
Gene familySubfamily
Transcription Factors Familyzf-C2H2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF05699Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan
PF00096zf-C2H2Zinc finger, C2H2 typeDomainInterproscan
PF13882Bravo_FIGEYBravo-like intracellular regionDomainInterproscan
PF00368HMG-CoA_redHydroxymethylglutaryl-coenzyme A reductaseFamilyInterproscan
PF20520Ac45-VOA1_TMV0 complex accessory subunit Ac45/VOA1 transmembrane domainDomainInterproscan
PF00147Fibrinogen_CFibrinogen beta and gamma chains, C-terminal globular domainDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR008906DomainHAT, C-terminal dimerisation domainInterproscan
IPR007587FamilySIT4 phosphatase-associated protein familyInterproscan
IPR052958FamilyInterferon-induced PKR regulatorInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR050888FamilyZinc Finger C2H2-type Transcription RegulatorsInterproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR026966DomainNeurofascin/L1/NrCAM, C-terminal domainInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR023074Homologous_superfamilyHydroxymethylglutaryl-CoA reductase, class I/II, catalytic domain superfamilyInterproscan
IPR002202FamilyHydroxymethylglutaryl-CoA reductase, class I/IIInterproscan
IPR009029Homologous_superfamilyHydroxymethylglutaryl-CoA reductase, class I/II, substrate-binding domain superfamilyInterproscan
IPR008388FamilyV0 complex accessory subunit Ac45Interproscan
IPR046756DomainV-type proton ATPase subunit S1/VOA1, transmembrane domainInterproscan
IPR014716Homologous_superfamilyFibrinogen, alpha/beta/gamma chain, C-terminal globular, subdomain 1Interproscan
IPR002181DomainFibrinogen, alpha/beta/gamma chain, C-terminal globular domainInterproscan
IPR036056Homologous_superfamilyFibrinogen-like, C-terminalInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR12634SIT4 YEAST -ASSOCIATING PROTEIN-RELATEDInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR4628952 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATEDInterproscan
PTHR24406TRANSCRIPTIONAL REPRESSOR CTCFL-RELATEDInterproscan
PTHR105723-HYDROXY-3-METHYLGLUTARYL-COENZYME A REDUCTASEInterproscan
PTHR12471VACUOLAR ATP SYNTHASE SUBUNIT S1Interproscan
PTHR16146INTELECTINInterproscan
PTHR38681RETROVIRUS-RELATED POL POLYPROTEIN FROM TRANSPOSON 412-LIKE PROTEIN-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0019888Molecular Functionprotein phosphatase regulator activityInterproscan
GO:0019903Molecular Functionprotein phosphatase bindingInterproscan
GO:0043666Biological Processobsolete regulation of phosphoprotein phosphatase activityInterproscan
GO:0005694Cellular ComponentchromosomeInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0043035Molecular Functionchromatin insulator sequence bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0004420Molecular Functionhydroxymethylglutaryl-CoA reductase (NADPH) activityInterproscan
GO:0015936Biological Processcoenzyme A metabolic processInterproscan
GO:0016616Molecular Functionoxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptorInterproscan
GO:0005778Cellular Componentperoxisomal membraneInterproscan
GO:0005789Cellular Componentendoplasmic reticulum membraneInterproscan
GO:0008299Biological Processisoprenoid biosynthetic processInterproscan
GO:0016126Biological Processsterol biosynthetic processInterproscan
GO:0005615Cellular Componentextracellular spaceInterproscan
GO:0070492Molecular Functionoligosaccharide bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan

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