Gene detail

Detailed information of Aala_g1019.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_044165478.1, uncharacterized protein LOC122949430 [Acropora millepora]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
P55265	Double-stranded RNA-specific adenosine deaminase OS=Homo sapiens OX=9606 GN=ADAR PE=1 SV=4
Q99MU3	Double-stranded RNA-specific adenosine deaminase OS=Mus musculus OX=10090 GN=Adar PE=1 SV=2
P55266	Double-stranded RNA-specific adenosine deaminase OS=Rattus norvegicus OX=10116 GN=Adar PE=1 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF00595	PDZ	PDZ domain	Domain	Interproscan
PF02137	A_deamin	Adenosine-deaminase (editase) domain	Family	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR052160	Family	Gypsy Retrotransposon Integrase-like	Interproscan
IPR012337	Homologous_superfamily	Ribonuclease H-like superfamily	Interproscan
IPR036397	Homologous_superfamily	Ribonuclease H superfamily	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR001478	Domain	PDZ domain	Interproscan
IPR036034	Homologous_superfamily	PDZ superfamily	Interproscan
IPR051342	Family	PDZ domain-containing scaffold protein	Interproscan
IPR002466	Domain	Adenosine deaminase/editase	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47018	CXC DOMAIN-CONTAINING PROTEIN-RELATED	Interproscan
PTHR47266	ENDONUCLEASE-RELATED	Interproscan
PTHR46238	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR19964	MULTIPLE PDZ DOMAIN PROTEIN	Interproscan
PTHR10910	EUKARYOTE SPECIFIC DSRNA BINDING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0003723	Molecular Function	RNA binding	Interproscan
GO:0004000	Molecular Function	adenosine deaminase activity	Interproscan
GO:0006396	Biological Process	RNA processing	Interproscan
GO:0003725	Molecular Function	double-stranded RNA binding	Interproscan
GO:0003726	Molecular Function	double-stranded RNA adenosine deaminase activity	Interproscan
GO:0005730	Cellular Component	nucleolus	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0006382	Biological Process	adenosine to inosine editing	Interproscan
GO:0008251	Molecular Function	tRNA-specific adenosine deaminase activity	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K04645	CLTB, LCB; clathrin light chain B	-	Transfer RNA biogenesis	ko03016	deepkoala
K04645	CLTB, LCB; clathrin light chain B	-	Membrane trafficking	ko04131	deepkoala