Detailed information of Aala_g1025.t1 in Alatina alata

Genomic Location: :...
NR annotation: PHR00840.1, hypothetical protein COB32_11720 [Halomonas sp.]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
P11369LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2
O00370LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1
P08548LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF04952AstE_AspASuccinylglutamate desuccinylase / Aspartoacylase familyDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR050178FamilyAspA/AstE family amino acid metabolism and detoxificationInterproscan
IPR016708FamilyAspartoacylaseInterproscan
IPR007036FamilySuccinylglutamate desuccinylase/aspartoacylaseInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan
IPR014010DomainREJ domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR15162ASPARTOACYLASEInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR46459E1A-BINDING PROTEIN P400-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005829Cellular ComponentcytosolInterproscan
GO:0016811Molecular Functionhydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amidesInterproscan
GO:0016788Molecular Functionhydrolase activity, acting on ester bondsInterproscan
GO:0000812Cellular ComponentSwr1 complexInterproscan
GO:0003682Molecular Functionchromatin bindingInterproscan
GO:0006281Biological ProcessDNA repairInterproscan
GO:0035267Cellular ComponentNuA4 histone acetyltransferase complexInterproscan
GO:0043967Biological Processobsolete histone H4 acetylationInterproscan

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