Detailed information of Aala_g1028.t1 in Alatina alata

Genomic Location: :...
NR annotation: KAG5700442.1, hypothetical protein BaRGS_010355 [Batillaria attramentaria]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q03279Retrovirus-related Pol polyprotein from type-1 retrotransposable element R2 (Fragment) OS=Bradysia coprophila OX=38358 PE=4 SV=1
P0CV25Secreted RxLR effector protein 78 OS=Plasmopara viticola OX=143451 GN=RXLR78 PE=3 SV=1
F6QZ15[F-actin]-monooxygenase mical2 OS=Xenopus tropicalis OX=8364 GN=mical2 PE=3 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF17832Pre-PUAPre-PUA-like domainDomainInterproscan
PF14529Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036188Homologous_superfamilyFAD/NAD(P)-binding domain superfamilyInterproscan
IPR050540FamilyF-actin Monooxygenase MicalInterproscan
IPR041366DomainPre-PUA domainInterproscan
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR005819FamilyLinker histone H1/H5Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23167CALPONIN HOMOLOGY DOMAIN-CONTAINING PROTEIN DDB_G0272472-RELATEDInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0000786Cellular ComponentnucleosomeInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006334Biological Processnucleosome assemblyInterproscan
GO:0030527Molecular Functionstructural constituent of chromatinInterproscan

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