Detailed information of Aala_g103.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_020614570.1, cullin-3-like [Orbicella faveolata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
B5DF89Cullin-3 OS=Rattus norvegicus OX=10116 GN=Cul3 PE=1 SV=2
Q9JLV5Cullin-3 OS=Mus musculus OX=10090 GN=Cul3 PE=1 SV=1
Q13618Cullin-3 OS=Homo sapiens OX=9606 GN=CUL3 PE=1 SV=2
Gene familySubfamily
Ubiquitin FamilyE3|E3 adaptor Cullin RING|Cullin

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00888CullinCullin familyRepeatInterproscan
PF03477ATP-coneATP cone domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF07727RVT_2Reverse transcriptase (RNA-dependent DNA polymerase)FamilyInterproscan
PF12295Symplekin_CSymplekin tight junction protein C terminalFamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR023213Homologous_superfamilyChloramphenicol acetyltransferase-like domain superfamilyInterproscan
IPR052058FamilyAlcohol O-acetyltransferase-related proteinInterproscan
IPR040311FamilyCoiled-coil domain-containing protein 3Interproscan
IPR016158DomainCullin homology domainInterproscan
IPR036317Homologous_superfamilyCullin homology domain superfamilyInterproscan
IPR045093FamilyCullinInterproscan
IPR016159Homologous_superfamilyCullin repeat-like-containing domain superfamilyInterproscan
IPR001373DomainCullin, N-terminalInterproscan
IPR008926Homologous_superfamilyRibonucleotide reductase R1 subunit, N-terminalInterproscan
IPR005144DomainATP-cone domainInterproscan
IPR039718FamilyRibonucleoside-diphosphate reductase large subunitInterproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR013103DomainReverse transcriptase, RNA-dependent DNA polymeraseInterproscan
IPR004244FamilyTransposase, L1Interproscan
IPR021850FamilySymplekin/Pta1Interproscan
IPR022075DomainSymplekin C-terminalInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR28037ALCOHOL O-ACETYLTRANSFERASE 1-RELATEDInterproscan
PTHR31663COILED-COIL DOMAIN-CONTAINING PROTEIN 3Interproscan
PTHR11932CULLINInterproscan
PTHR11573RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE LARGE CHAINInterproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan
PTHR46670ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR11505L1 TRANSPOSABLE ELEMENT-RELATEDInterproscan
PTHR15245SYMPLEKIN-RELATEDInterproscan
PTHR45749-Interproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0016567Biological Processprotein ubiquitinationInterproscan
GO:0031461Cellular Componentcullin-RING ubiquitin ligase complexInterproscan
GO:0031463Cellular ComponentCul3-RING ubiquitin ligase complexInterproscan
GO:0031625Molecular Functionubiquitin protein ligase bindingInterproscan
GO:0006511Biological Processubiquitin-dependent protein catabolic processInterproscan
GO:0004748Molecular Functionribonucleoside-diphosphate reductase activity, thioredoxin disulfide as acceptorInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0005971Cellular Componentribonucleoside-diphosphate reductase complexInterproscan
GO:0009263Biological Processdeoxyribonucleotide biosynthetic processInterproscan
GO:0003727Molecular Functionsingle-stranded RNA bindingInterproscan
GO:0032197Biological ProcessretrotranspositionInterproscan
GO:1990904Cellular Componentribonucleoprotein complexInterproscan
GO:0005847Cellular ComponentmRNA cleavage and polyadenylation specificity factor complexInterproscan
GO:0006378Biological Processobsolete mRNA polyadenylationInterproscan

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