Detailed information of Aala_g1033.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_040478716.1, LOW QUALITY PROTEIN: rho guanine nucleotide exchange factor 11-like, partial [Ursus maritimus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O15085Rho guanine nucleotide exchange factor 11 OS=Homo sapiens OX=9606 GN=ARHGEF11 PE=1 SV=1
Q8R4H2Rho guanine nucleotide exchange factor 12 OS=Mus musculus OX=10090 GN=Arhgef12 PE=1 SV=2
Q61210Rho guanine nucleotide exchange factor 1 OS=Mus musculus OX=10090 GN=Arhgef1 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02023SCANSCAN domainDomainInterproscan
PF07993NAD_binding_4Male sterility proteinFamilyInterproscan
PF13843DDE_Tnp_1_7Transposase IS4DomainInterproscan
PF00171AldedhAldehyde dehydrogenase familyFamilyInterproscan
PF03564DUF1759Protein of unknown function (DUF1759)FamilyInterproscan
PF00538Linker_histonelinker histone H1 and H5 familyDomainInterproscan
PF17838PH_16PH domainDomainInterproscan
PF07727RVT_2Reverse transcriptase (RNA-dependent DNA polymerase)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR011049Homologous_superfamilySerralysin-like metalloprotease, C-terminalInterproscan
IPR003309DomainSCAN domainInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR038269Homologous_superfamilySCAN domain superfamilyInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR052560FamilyRNA-directed DNA polymerase, mobile elementInterproscan
IPR016024Homologous_superfamilyArmadillo-type foldInterproscan
IPR013120DomainFatty acyl-coenzyme A reductase, NAD-binding domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR029526DomainPiggyBac transposable element-derived proteinInterproscan
IPR010061FamilyMethylmalonate-semialdehyde dehydrogenaseInterproscan
IPR015590DomainAldehyde dehydrogenase domainInterproscan
IPR016162Homologous_superfamilyAldehyde dehydrogenase, N-terminalInterproscan
IPR016161Homologous_superfamilyAldehyde/histidinol dehydrogenaseInterproscan
IPR016163Homologous_superfamilyAldehyde dehydrogenase, C-terminalInterproscan
IPR005312FamilyProtein of unknown function DUF1759Interproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR005818DomainLinker histone H1/H5, domain H15Interproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR041020DomainARHGEF1-like, PH domainInterproscan
IPR011993Homologous_superfamilyPH-like domain superfamilyInterproscan
IPR013103DomainReverse transcriptase, RNA-dependent DNA polymeraseInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46888ZINC KNUCKLE DOMAINCONTAINING PROTEIN-RELATEDInterproscan
PTHR36688ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR46599PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4Interproscan
PTHR43866MALONATE-SEMIALDEHYDE DEHYDROGENASEInterproscan
PTHR47331PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR45872RHO GUANINE NUCLEOTIDE EXCHANGE FACTOR 2, ISOFORM DInterproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0004491Molecular Functionmethylmalonate-semialdehyde dehydrogenase (acylating, NAD) activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006210Biological Processthymine catabolic processInterproscan
GO:0006574Biological Processvaline catabolic processInterproscan
GO:0018478Molecular Functionmalonate-semialdehyde dehydrogenase (acetylating) activityInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0016620Molecular Functionoxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptorInterproscan
GO:0000786Cellular ComponentnucleosomeInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006334Biological Processnucleosome assemblyInterproscan
GO:0001664Molecular FunctionG protein-coupled receptor bindingInterproscan
GO:0005085Molecular Functionguanyl-nucleotide exchange factor activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan

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