Detailed information of Aala_g1043.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_037776987.1, uncharacterized protein LOC119573958 [Penaeus monodon]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q9Z0W7Chloride intracellular channel protein 4 OS=Rattus norvegicus OX=10116 GN=Clic4 PE=1 SV=3
Q9XSA7Chloride intracellular channel protein 4 OS=Bos taurus OX=9913 GN=CLIC4 PE=2 SV=3
Q9QYB1Chloride intracellular channel protein 4 OS=Mus musculus OX=10090 GN=Clic4 PE=1 SV=3

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF02931Neur_chan_LBDNeurotransmitter-gated ion-channel ligand binding domainFamilyInterproscan
PF02932Neur_chan_membNeurotransmitter-gated ion-channel transmembrane regionFamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF13409GST_N_2Glutathione S-transferase, N-terminal domainDomainInterproscan
PF13920zf-C3HC4_3Zinc finger, C3HC4 type (RING finger)DomainInterproscan
PF03564DUF1759Protein of unknown function (DUF1759)FamilyInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR036719Homologous_superfamilyNeurotransmitter-gated ion-channel transmembrane domain superfamilyInterproscan
IPR036734Homologous_superfamilyNeurotransmitter-gated ion-channel ligand-binding domain superfamilyInterproscan
IPR006202DomainNeurotransmitter-gated ion-channel ligand-binding domainInterproscan
IPR018000Conserved_siteNeurotransmitter-gated ion-channel, conserved siteInterproscan
IPR006201FamilyNeurotransmitter-gated ion-channelInterproscan
IPR006029DomainNeurotransmitter-gated ion-channel transmembrane domainInterproscan
IPR038050Homologous_superfamilyNeuronal acetylcholine receptorInterproscan
IPR001995DomainPeptidase A2A, retrovirus, catalyticInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR034132DomainRetropepsin Saci-like domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR001969Active_siteAspartic peptidase, active siteInterproscan
IPR036282Homologous_superfamilyGlutathione S-transferase, C-terminal domain superfamilyInterproscan
IPR004045DomainGlutathione S-transferase, N-terminalInterproscan
IPR036249Homologous_superfamilyThioredoxin-like superfamilyInterproscan
IPR002946FamilyIntracellular chloride channelInterproscan
IPR029063Homologous_superfamilyS-adenosyl-L-methionine-dependent methyltransferase superfamilyInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR001841DomainZinc finger, RING-typeInterproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan
IPR011527DomainABC transporter type 1, transmembrane domainInterproscan
IPR005312FamilyProtein of unknown function DUF1759Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR18945NEUROTRANSMITTER GATED ION CHANNELInterproscan
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR43920CHLORIDE INTRACELLULAR CHANNEL, ISOFORM AInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan
PTHR47331PHD-TYPE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0006811Biological Processmonoatomic ion transportInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005230Molecular Functionextracellular ligand-gated monoatomic ion channel activityInterproscan
GO:0004888Molecular Functiontransmembrane signaling receptor activityInterproscan
GO:0005216Molecular Functionmonoatomic ion channel activityInterproscan
GO:0005231Molecular Functionexcitatory extracellular ligand-gated monoatomic ion channel activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0007165Biological Processsignal transductionInterproscan
GO:0007268Biological Processchemical synaptic transmissionInterproscan
GO:0030594Molecular Functionneurotransmitter receptor activityInterproscan
GO:0034220Biological Processmonoatomic ion transmembrane transportInterproscan
GO:0042391Biological Processregulation of membrane potentialInterproscan
GO:0043005Cellular Componentneuron projectionInterproscan
GO:0045202Cellular ComponentsynapseInterproscan
GO:0050877Biological Processnervous system processInterproscan
GO:1904315Molecular Functiontransmitter-gated monoatomic ion channel activity involved in regulation of postsynaptic membrane potentialInterproscan
GO:0004190Molecular Functionaspartic-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0005254Molecular Functionchloride channel activityInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0006821Biological Processchloride transportInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0140359Molecular FunctionABC-type transporter activityInterproscan

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