Detailed information of Aala_g1044.t1 in Alatina alata

Genomic Location: :...
NR annotation: OCT97179.1, hypothetical protein XELAEV_18009406mg [Xenopus laevis]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q800L6CXXC-type zinc finger protein 4 OS=Xenopus laevis OX=8355 GN=cxxc4 PE=2 SV=1
Q0VFP6CXXC-type zinc finger protein 4 OS=Xenopus tropicalis OX=8364 GN=cxxc4 PE=2 SV=2
A0JP82Methylcytosine dioxygenase tet3 OS=Xenopus tropicalis OX=8364 GN=tet3 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF01619Pro_dhProline dehydrogenaseFamilyInterproscan
PF00041fn3Fibronectin type III domainDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF17917RT_RNaseHRNase H-like domain found in reverse transcriptaseDomainInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF02008zf-CXXCCXXC zinc finger domainDomainInterproscan
PF05699Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan
PF14529Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR029041Homologous_superfamilyFAD-linked oxidoreductase-likeInterproscan
IPR015659FamilyProline oxidase familyInterproscan
IPR002872DomainProline dehydrogenase domainInterproscan
IPR003961DomainFibronectin type IIIInterproscan
IPR013783Homologous_superfamilyImmunoglobulin-like foldInterproscan
IPR036116Homologous_superfamilyFibronectin type III superfamilyInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR041373DomainReverse transcriptase, RNase H-like domainInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR002857DomainZinc finger, CXXC-typeInterproscan
IPR040388FamilyCXXC-type zinc finger protein CXXC4/CXXC5Interproscan
IPR052958FamilyInterferon-induced PKR regulatorInterproscan
IPR008906DomainHAT, C-terminal dimerisation domainInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR19446REVERSE TRANSCRIPTASESInterproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR13914PROLINE OXIDASEInterproscan
PTHR35378UNNAMED PRODUCTInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR13419ZINC FINGER-CONTAININGInterproscan
PTHR4628952 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATEDInterproscan
PTHR23227BUCENTAUR RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004657Molecular Functionproline dehydrogenase activityInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006562Biological Processproline catabolic processInterproscan
GO:0010133Biological Processproline catabolic process to glutamateInterproscan
GO:0071949Molecular FunctionFAD bindingInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0008327Molecular Functionmethyl-CpG bindingInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11469RYBP; RING1 and YY1-binding protein-Chromosome and associated proteinsko03036deepkoala

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