Detailed information of Aala_g105.t1 in Alatina alata

Genomic Location: :...
NR annotation: KFM81911.1, Cullin-3, partial [Stegodyphus mimosarum]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q6DE95Cullin-3-A OS=Xenopus laevis OX=8355 GN=cul3a PE=1 SV=1
Q6GPF3Cullin-3-B OS=Xenopus laevis OX=8355 GN=cul3b PE=1 SV=1
Q13618Cullin-3 OS=Homo sapiens OX=9606 GN=CUL3 PE=1 SV=2
Gene familySubfamily
Transcription Factors FamilyPC4
Ubiquitin FamilyE3|E3 activity RING|PHD

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF14529Exo_endo_phos_2Endonuclease-reverse transcriptase DomainInterproscan
PF00628PHDPHD-fingerDomainInterproscan
PF01179Cu_amine_oxidCopper amine oxidase, enzyme domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF02229PC4Transcriptional Coactivator p15 (PC4)DomainInterproscan
PF10557Cullin_Nedd8Cullin protein neddylation domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR052035FamilyZinc finger BED domain-containingInterproscan
IPR019786Conserved_siteZinc finger, PHD-type, conserved siteInterproscan
IPR011011Homologous_superfamilyZinc finger, FYVE/PHD-typeInterproscan
IPR013083Homologous_superfamilyZinc finger, RING/FYVE/PHD-typeInterproscan
IPR001965DomainZinc finger, PHD-typeInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR019787DomainZinc finger, PHD-fingerInterproscan
IPR035892Homologous_superfamilyC2 domain superfamilyInterproscan
IPR036460Homologous_superfamilyCopper amine oxidase, catalytic domain superfamilyInterproscan
IPR000269FamilyCopper amine oxidaseInterproscan
IPR015798DomainCopper amine oxidase, catalytic domainInterproscan
IPR049948Conserved_siteCopper amine oxidase, TPQ-binding siteInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR009044Homologous_superfamilyssDNA-binding transcriptional regulatorInterproscan
IPR003173DomainTranscriptional coactivator p15 (PC4), C-terminalInterproscan
IPR045125FamilyRNA polymerase II transcriptional coactivator Sub1/Tcp4-likeInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR036390Homologous_superfamilyWinged helix DNA-binding domain superfamilyInterproscan
IPR036388Homologous_superfamilyWinged helix-like DNA-binding domain superfamilyInterproscan
IPR019559DomainCullin protein, neddylation domainInterproscan
IPR004244FamilyTransposase, L1Interproscan
IPR017452DomainGPCR, rhodopsin-like, 7TMInterproscan
IPR000515DomainABC transporter type 1, transmembrane domain MetI-likeInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46481ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4Interproscan
PTHR33395TRANSCRIPTASE, PUTATIVE-RELATED-RELATEDInterproscan
PTHR10638COPPER AMINE OXIDASEInterproscan
PTHR43073DIHYDROPYRIMIDINE DEHYDROGENASE [NADP(+)]Interproscan
PTHR46670ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR13215RNA POLYMERASE II TRANSCRIPTIONAL COACTIVATORInterproscan
PTHR37162HAT FAMILY DIMERISATION DOMAINCONTAINING PROTEIN-RELATEDInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR11505L1 TRANSPOSABLE ELEMENT-RELATEDInterproscan
PTHR35450REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0007508Biological Processlarval heart developmentInterproscan
GO:0031012Cellular Componentextracellular matrixInterproscan
GO:0061343Biological Processcell adhesion involved in heart morphogenesisInterproscan
GO:0005507Molecular Functioncopper ion bindingInterproscan
GO:0008131Molecular Functionprimary methylamine oxidase activityInterproscan
GO:0009308Biological Processamine metabolic processInterproscan
GO:0048038Molecular Functionquinone bindingInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:0002058Molecular Functionuracil bindingInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0006210Biological Processthymine catabolic processInterproscan
GO:0006212Biological Processuracil catabolic processInterproscan
GO:0017113Molecular Functiondihydropyrimidine dehydrogenase (NADP+) activityInterproscan
GO:0050661Molecular FunctionNADP bindingInterproscan
GO:0003677Molecular FunctionDNA bindingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0003713Molecular Functiontranscription coactivator activityInterproscan
GO:0060261Biological Processpositive regulation of transcription initiation by RNA polymerase IIInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan
GO:0003727Molecular Functionsingle-stranded RNA bindingInterproscan
GO:0032197Biological ProcessretrotranspositionInterproscan
GO:1990904Cellular Componentribonucleoprotein complexInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K11182AOC1, ABP1; diamine oxidaseEC:1.4.3.22
Tryptophan metabolismko00380deepkoala

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