Gene detail

Detailed information of Aala_g1053.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_029209968.1, transitional endoplasmic reticulum ATPase [Acropora millepora]

Gene Structure

Sequence

Uniprot

Uniprot term	Description
Q7KN62	Transitional endoplasmic reticulum ATPase TER94 OS=Drosophila melanogaster OX=7227 GN=TER94 PE=1 SV=1
Q7ZU99	Transitional endoplasmic reticulum ATPase OS=Danio rerio OX=7955 GN=vcp PE=1 SV=1
Q3ZBT1	Transitional endoplasmic reticulum ATPase OS=Bos taurus OX=9913 GN=VCP PE=2 SV=1

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00488	MutS_V	MutS domain V	Domain	Interproscan
PF02437	Ski_Sno	SKI/SNO/DAC family	Family	Interproscan
PF13843	DDE_Tnp_1_7	Transposase IS4	Domain	Interproscan
PF00004	AAA	ATPase family associated with various cellular activities (AAA)	Domain	Interproscan
PF17862	AAA_lid_3	AAA+ lid domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR045076	Family	DNA mismatch repair MutS family	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR000432	Domain	DNA mismatch repair protein MutS, C-terminal	Interproscan
IPR018247	Binding_site	EF-Hand 1, calcium-binding site	Interproscan
IPR003380	Domain	SKI/SNO/DAC domain	Interproscan
IPR009061	Homologous_superfamily	Putative DNA-binding domain superfamily	Interproscan
IPR037000	Homologous_superfamily	Ski-like, DNA-binding domain superfamily	Interproscan
IPR029526	Domain	PiggyBac transposable element-derived protein	Interproscan
IPR050168	Family	AAA ATPase domain-containing protein	Interproscan
IPR003959	Domain	ATPase, AAA-type, core	Interproscan
IPR041569	Domain	AAA ATPase, AAA+ lid domain	Interproscan
IPR003960	Conserved_site	ATPase, AAA-type, conserved site	Interproscan
IPR003593	Domain	AAA+ ATPase domain	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR11361	DNA MISMATCH REPAIR PROTEIN MUTS FAMILY MEMBER	Interproscan
PTHR47331	PHD-TYPE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR46599	PIGGYBAC TRANSPOSABLE ELEMENT-DERIVED PROTEIN 4	Interproscan
PTHR23077	AAA-FAMILY ATPASE	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003690	Molecular Function	double-stranded DNA binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006298	Biological Process	mismatch repair	Interproscan
GO:0006312	Biological Process	mitotic recombination	Interproscan
GO:0030983	Molecular Function	mismatched DNA binding	Interproscan
GO:0140664	Molecular Function	ATP-dependent DNA damage sensor activity	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0030433	Biological Process	obsolete ubiquitin-dependent ERAD pathway	Interproscan
GO:0030970	Biological Process	retrograde protein transport, ER to cytosol	Interproscan
GO:0031593	Molecular Function	polyubiquitin modification-dependent protein binding	Interproscan
GO:0034098	Cellular Component	VCP-NPL4-UFD1 AAA ATPase complex	Interproscan
GO:0051228	Biological Process	mitotic spindle disassembly	Interproscan
GO:0071712	Biological Process	obsolete ER-associated misfolded protein catabolic process	Interproscan
GO:0097352	Biological Process	autophagosome maturation	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K07334	higB-1; toxin HigB-1	-	Ribosome biogenesis	ko03009	deepkoala
K07334	higB-1; toxin HigB-1	-	Prokaryotic defense system	ko02048	deepkoala