Detailed information of Aala_g1058.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_019746136.1, PREDICTED: uncharacterized protein LOC109528182 [Hippocampus comes]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot Gene family
Uniprot termDescription
Q8BU30Isoleucine--tRNA ligase, cytoplasmic OS=Mus musculus OX=10090 GN=Iars1 PE=1 SV=2
P41252Isoleucine--tRNA ligase, cytoplasmic OS=Homo sapiens OX=9606 GN=IARS1 PE=1 SV=2
Q21926Isoleucine--tRNA ligase, cytoplasmic OS=Caenorhabditis elegans OX=6239 GN=iars-1 PE=3 SV=1
Gene familySubfamily
Transcription Factors Familyzf-C2H2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13465zf-H2C2_2Zinc-finger double domainDomainInterproscan
PF00096zf-C2H2Zinc finger, C2H2 typeDomainInterproscan
PF07657MNNLN terminus of Notch ligand C2-like domainDomainInterproscan
PF00133tRNA-synt_1tRNA synthetases class I (I, L, M and V)DomainInterproscan
PF04547AnoctaminCalcium-activated chloride channelFamilyInterproscan
PF00665rveIntegrase core domainDomainInterproscan
PF07727RVT_2Reverse transcriptase (RNA-dependent DNA polymerase)FamilyInterproscan
PF14223Retrotran_gag_2gag-polypeptide of LTR copia-typeFamilyInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR013087DomainZinc finger C2H2-typeInterproscan
IPR036236Homologous_superfamilyZinc finger C2H2 superfamilyInterproscan
IPR011651DomainNotch ligand, N-terminal domainInterproscan
IPR011527DomainABC transporter type 1, transmembrane domainInterproscan
IPR023586FamilyIsoleucine-tRNA ligase, type 2Interproscan
IPR014729Homologous_superfamilyRossmann-like alpha/beta/alpha sandwich foldInterproscan
IPR002300DomainAminoacyl-tRNA synthetase, class IaInterproscan
IPR052035FamilyZinc finger BED domain-containingInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR049452DomainAnoctamin, transmembrane domainInterproscan
IPR007632FamilyAnoctaminInterproscan
IPR026630FamilyEPM2A-interacting protein 1/ZBED8-likeInterproscan
IPR006634DomainTRAM/LAG1/CLN8 homology domainInterproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR036875Homologous_superfamilyZinc finger, CCHC-type superfamilyInterproscan
IPR013103DomainReverse transcriptase, RNA-dependent DNA polymeraseInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR001878DomainZinc finger, CCHC-typeInterproscan
IPR000477DomainReverse transcriptase domainInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR23235KRUEPPEL-LIKE TRANSCRIPTION FACTORInterproscan
PTHR42780SOLEUCYL-TRNA SYNTHETASEInterproscan
PTHR46954C2H2-TYPE DOMAIN-CONTAINING PROTEINInterproscan
PTHR46481ZINC FINGER BED DOMAIN-CONTAINING PROTEIN 4Interproscan
PTHR12308ANOCTAMINInterproscan
PTHR45913EPM2A-INTERACTING PROTEIN 1Interproscan
PTHR42648TRANSPOSASE, PUTATIVE-RELATEDInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0000978Molecular FunctionRNA polymerase II cis-regulatory region sequence-specific DNA bindingInterproscan
GO:0000981Molecular FunctionDNA-binding transcription factor activity, RNA polymerase II-specificInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0007219Biological ProcessNotch signaling pathwayInterproscan
GO:0007275Biological Processmulticellular organism developmentInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0005524Molecular FunctionATP bindingInterproscan
GO:0055085Biological Processtransmembrane transportInterproscan
GO:0140359Molecular FunctionABC-type transporter activityInterproscan
GO:0004822Molecular Functionisoleucine-tRNA ligase activityInterproscan
GO:0006428Biological Processisoleucyl-tRNA aminoacylationInterproscan
GO:0000166Molecular Functionnucleotide bindingInterproscan
GO:0004812Molecular Functionaminoacyl-tRNA ligase activityInterproscan
GO:0006418Biological ProcesstRNA aminoacylation for protein translationInterproscan
GO:0005254Molecular Functionchloride channel activityInterproscan
GO:0005886Cellular Componentplasma membraneInterproscan
GO:1902476Biological Processchloride transmembrane transportInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0008270Molecular Functionzinc ion bindingInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K17518CLECL1; C-type lectin-like domain family 1-Proteoglycansko00535deepkoala
Lectinsko04091deepkoala

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