Detailed information of Aala_g1060.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_025093775.1, uncharacterized protein LOC112563723 [Pomacea canaliculata]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8S9J1Protoporphyrinogen oxidase 2, chloroplastic/mitochondrial OS=Arabidopsis thaliana OX=3702 GN=PPOX2 PE=1 SV=1
O24164Protoporphyrinogen oxidase, mitochondrial OS=Nicotiana tabacum OX=4097 GN=PPXII PE=1 SV=1
Q94IG7Protoporphyrinogen oxidase 2 OS=Spinacia oleracea OX=3562 GN=POX2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00850Hist_deacetylHistone deacetylase domainDomainInterproscan
PF05699Dimer_Tnp_hAThAT family C-terminal dimerisation regionDomainInterproscan
PF13450NAD_binding_8NAD(P)-binding Rossmann-like domainDomainInterproscan
PF03953Tubulin_CTubulin C-terminal domainDomainInterproscan
PF00091TubulinTubulin/FtsZ family, GTPase domainDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR003084FamilyHistone deacetylaseInterproscan
IPR037138Homologous_superfamilyHistone deacetylase domain superfamilyInterproscan
IPR050284FamilyHistone deacetylase and polyamine deacetylaseInterproscan
IPR023696Homologous_superfamilyUreohydrolase domain superfamilyInterproscan
IPR023801DomainHistone deacetylase domainInterproscan
IPR000286FamilyHistone deacetylase familyInterproscan
IPR052958FamilyInterferon-induced PKR regulatorInterproscan
IPR008906DomainHAT, C-terminal dimerisation domainInterproscan
IPR050935FamilyBromodomain-containing chromatin readerInterproscan
IPR036188Homologous_superfamilyFAD/NAD(P)-binding domain superfamilyInterproscan
IPR050464FamilyZeta Carotene Desaturase and Related OxidoreductasesInterproscan
IPR003008DomainTubulin/FtsZ, GTPase domainInterproscan
IPR017975Conserved_siteTubulin, conserved siteInterproscan
IPR036525Homologous_superfamilyTubulin/FtsZ, GTPase domain superfamilyInterproscan
IPR002452FamilyAlpha tubulinInterproscan
IPR018316DomainTubulin/FtsZ, 2-layer sandwich domainInterproscan
IPR000217FamilyTubulinInterproscan
IPR037103Homologous_superfamilyTubulin/FtsZ-like, C-terminal domainInterproscan
IPR008280Homologous_superfamilyTubulin/FtsZ, C-terminalInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10625HISTONE DEACETYLASE HDAC1-RELATEDInterproscan
PTHR4628952 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATEDInterproscan
PTHR22880FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINSInterproscan
PTHR42923PROTOPORPHYRINOGEN OXIDASEInterproscan
PTHR11588TUBULINInterproscan
PTHR46238REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004407Molecular Functionhistone deacetylase activityInterproscan
GO:0000122Biological Processnegative regulation of transcription by RNA polymerase IIInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0016575Biological Processobsolete histone deacetylationInterproscan
GO:0016581Cellular ComponentNuRD complexInterproscan
GO:0046983Molecular Functionprotein dimerization activityInterproscan
GO:0000785Cellular ComponentchromatinInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan
GO:0006355Biological Processregulation of DNA-templated transcriptionInterproscan
GO:0070577Molecular Functionlysine-acetylated histone bindingInterproscan
GO:0016491Molecular Functionoxidoreductase activityInterproscan
GO:0005525Molecular FunctionGTP bindingInterproscan
GO:0005874Cellular ComponentmicrotubuleInterproscan
GO:0007017Biological Processmicrotubule-based processInterproscan
GO:0005200Molecular Functionstructural constituent of cytoskeletonInterproscan
GO:0000226Biological Processmicrotubule cytoskeleton organizationInterproscan
GO:0000278Biological Processmitotic cell cycleInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K06067HDAC1_2; histone deacetylase 1/2EC:3.5.1.98
Exosomeko04147deepkoala
Chromosome and associated proteinsko03036deepkoala

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