Detailed information of Aala_g1065.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_042885955.1, craniofacial development protein 2-like [Penaeus japonicus]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
O02751Craniofacial development protein 2 OS=Bos taurus OX=9913 GN=CFDP2 PE=1 SV=2
Q588U8Craniofacial development protein 2 OS=Tragulus javanicus OX=9849 GN=CFDP2 PE=2 SV=1
Q39575Dynein gamma chain, flagellar outer arm OS=Chlamydomonas reinhardtii OX=3055 GN=ODA2 PE=1 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF13637Ank_4Ankyrin repeats (many copies)RepeatInterproscan
PF12796Ank_2Ankyrin repeats (3 copies)RepeatInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF00023AnkAnkyrin repeatRepeatInterproscan
PF00338Ribosomal_S10Ribosomal protein S10p/S20eDomainInterproscan
PF00168C2C2 domainDomainInterproscan
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR026983FamilyDynein heavy chainInterproscan
IPR002110RepeatAnkyrin repeatInterproscan
IPR036770Homologous_superfamilyAnkyrin repeat-containing domain superfamilyInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR050663FamilyAnkyrin Repeat and SOCS BoxInterproscan
IPR027486DomainSmall ribosomal subunit protein uS10 domainInterproscan
IPR040055FamilySmall ribosomal subunit protein uS10mInterproscan
IPR036838Homologous_superfamilySmall ribosomal subunit protein uS10 domain superfamilyInterproscan
IPR001848FamilySmall ribosomal subunit protein uS10Interproscan
IPR035892Homologous_superfamilyC2 domain superfamilyInterproscan
IPR000008DomainC2 domainInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR027124FamilySWR1-complex protein 5/Craniofacial development protein 1/2Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR10676DYNEIN HEAVY CHAIN FAMILY PROTEINInterproscan
PTHR24198ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR34072ENZYMATIC POLYPROTEIN-RELATEDInterproscan
PTHR47027REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR46238REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR24193ANKYRIN REPEAT PROTEINInterproscan
PTHR13334MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S10Interproscan
PTHR23227BUCENTAUR RELATEDInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0007018Biological Processmicrotubule-based movementInterproscan
GO:0008569Molecular Functionminus-end-directed microtubule motor activityInterproscan
GO:0030286Cellular Componentdynein complexInterproscan
GO:0036157Cellular Componentouter dynein armInterproscan
GO:0036158Biological Processouter dynein arm assemblyInterproscan
GO:0045505Molecular Functiondynein intermediate chain bindingInterproscan
GO:0051959Molecular Functiondynein light intermediate chain bindingInterproscan
GO:0060294Biological Processcilium movement involved in cell motilityInterproscan
GO:0097729Cellular Component9+2 motile ciliumInterproscan
GO:0005515Molecular Functionprotein bindingInterproscan
GO:0000976Molecular Functiontranscription cis-regulatory region bindingInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0045944Biological Processpositive regulation of transcription by RNA polymerase IIInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0005763Cellular Componentmitochondrial small ribosomal subunitInterproscan
GO:0003735Molecular Functionstructural constituent of ribosomeInterproscan
GO:0005840Cellular ComponentribosomeInterproscan
GO:0006412Biological ProcesstranslationInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0006338Biological Processchromatin remodelingInterproscan

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