Gene detail

Detailed information of Aala_g107.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_022785184.1, zinc finger MYM-type protein 1-like [Stylophora pistillata]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q95NU5	Torsin-like protein OS=Caenorhabditis elegans OX=6239 GN=ooc-5 PE=1 SV=1
Q60HG2	Torsin-1A OS=Macaca fascicularis OX=9541 GN=TOR1A PE=2 SV=1
O14656	Torsin-1A OS=Homo sapiens OX=9606 GN=TOR1A PE=1 SV=1

Gene family	Subfamily
Transcription Factors Family	zf-BED

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF02892	zf-BED	BED zinc finger	Domain	Interproscan
PF21376	TOR1A_C	Torsin-1A, C-terminal domain	Domain	Interproscan
PF06309	Torsin	Torsin	Family	Interproscan
PF14223	Retrotran_gag_2	gag-polypeptide of LTR copia-type	Family	Interproscan
PF13976	gag_pre-integrs	GAG-pre-integrase domain	Domain	Interproscan
PF07727	RVT_2	Reverse transcriptase (RNA-dependent DNA polymerase)	Family	Interproscan
PF07679	I-set	Immunoglobulin I-set domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR026630	Family	EPM2A-interacting protein 1/ZBED8-like	Interproscan
IPR015421	Homologous_superfamily	Pyridoxal phosphate-dependent transferase, major domain	Interproscan
IPR052958	Family	Interferon-induced PKR regulator	Interproscan
IPR003656	Domain	Zinc finger, BED-type	Interproscan
IPR036028	Homologous_superfamily	SH3-like domain superfamily	Interproscan
IPR049337	Domain	Torsin-1A, C-terminal domain	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR001878	Domain	Zinc finger, CCHC-type	Interproscan
IPR010448	Family	Torsin	Interproscan
IPR025724	Domain	GAG-pre-integrase domain	Interproscan
IPR013103	Domain	Reverse transcriptase, RNA-dependent DNA polymerase	Interproscan
IPR036875	Homologous_superfamily	Zinc finger, CCHC-type superfamily	Interproscan
IPR001270	Family	ClpA/B family	Interproscan
IPR013098	Domain	Immunoglobulin I-set	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR036179	Homologous_superfamily	Immunoglobulin-like domain superfamily	Interproscan
IPR050958	Family	Cell Adhesion and Cytoskeletal Organization	Interproscan
IPR003598	Domain	Immunoglobulin subtype 2	Interproscan
IPR007110	Domain	Immunoglobulin-like domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR016024	Homologous_superfamily	Armadillo-type fold	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR45913	EPM2A-INTERACTING PROTEIN 1	Interproscan
PTHR43206	AMINOTRANSFERASE	Interproscan
PTHR46289	52 KDA REPRESSOR OF THE INHIBITOR OF THE PROTEIN KINASE-LIKE PROTEIN-RELATED	Interproscan
PTHR35846	PROTEIN CBG05131	Interproscan
PTHR10760	TORSIN	Interproscan
PTHR45080	CONTACTIN 5	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003867	Molecular Function	obsolete 4-aminobutyrate transaminase activity	Interproscan
GO:0005739	Cellular Component	mitochondrion	Interproscan
GO:0009450	Biological Process	gamma-aminobutyric acid catabolic process	Interproscan
GO:0030170	Molecular Function	pyridoxal phosphate binding	Interproscan
GO:0003677	Molecular Function	DNA binding	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0005524	Molecular Function	ATP binding	Interproscan
GO:0016887	Molecular Function	ATP hydrolysis activity	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0007156	Biological Process	homophilic cell adhesion via plasma membrane adhesion molecules	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K22756	NSMCE2, NSE2; E3 SUMO-protein ligase NSE2	EC:2.3.2.-	DNA repair and recombination proteins	ko03400	deepkoala