Detailed information of Aala_g1074.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_012556503.2, uncharacterized protein LOC100207710 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q3TLI0Trafficking protein particle complex subunit 10 OS=Mus musculus OX=10090 GN=Trappc10 PE=1 SV=3
P48553Trafficking protein particle complex subunit 10 OS=Homo sapiens OX=9606 GN=TRAPPC10 PE=1 SV=2
Q66IY8Interferon regulatory factor 2-binding protein-like A OS=Xenopus laevis OX=8355 GN=irf2bpl-a PE=2 SV=1

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF00665rveIntegrase core domainDomainInterproscan
PF17919RT_RNaseH_2RNase H-like domain found in reverse transcriptaseDomainInterproscan
PF17921Integrase_H2C2Integrase zinc binding domainDomainInterproscan
PF00078RVT_1Reverse transcriptase (RNA-dependent DNA polymerase)DomainInterproscan
PF18139LSDAT_eukSLOG in TRPMFamilyInterproscan
PF11261IRF-2BP1_2Interferon regulatory factor 2-binding protein zinc fingerDomainInterproscan
PF03372Exo_endo_phosEndonuclease/Exonuclease/phosphatase familyDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR040379FamilyWD repeat-containing protein 19/dyf-2Interproscan
IPR001584DomainIntegrase, catalytic coreInterproscan
IPR021109Homologous_superfamilyAspartic peptidase domain superfamilyInterproscan
IPR036397Homologous_superfamilyRibonuclease H superfamilyInterproscan
IPR000477DomainReverse transcriptase domainInterproscan
IPR043128Homologous_superfamilyReverse transcriptase/Diguanylate cyclase domainInterproscan
IPR041577DomainReverse transcriptase/retrotransposon-derived protein, RNase H-like domainInterproscan
IPR041588DomainIntegrase zinc-binding domainInterproscan
IPR050951FamilyRetrovirus-related Pol polyproteinInterproscan
IPR043502Homologous_superfamilyDNA/RNA polymerase superfamilyInterproscan
IPR034132DomainRetropepsin Saci-like domainInterproscan
IPR001995DomainPeptidase A2A, retrovirus, catalyticInterproscan
IPR012337Homologous_superfamilyRibonuclease H-like superfamilyInterproscan
IPR001969Active_siteAspartic peptidase, active siteInterproscan
IPR050927FamilyTransient receptor potential cation channel MInterproscan
IPR041491DomainTRPM, SLOG domainInterproscan
IPR022750DomainInterferon regulatory factor 2-binding protein 1 & 2, zinc fingerInterproscan
IPR044882Homologous_superfamilyInterferon regulatory factor 2-binding protein 1/2, C3HC4-type RING finger superfamilyInterproscan
IPR005135DomainEndonuclease/exonuclease/phosphataseInterproscan
IPR036691Homologous_superfamilyEndonuclease/exonuclease/phosphatase superfamilyInterproscan
IPR045126FamilyTrafficking protein particle complex subunit TRAPPC10/Trs130Interproscan

 PANTHER
PANTHER termDescriptionSource
PTHR14920OSMOTIC AVOIDANCE ABNORMAL PROTEIN 1/WD REPEAT MEMBRANE PROTEINInterproscan
PTHR37984PROTEIN CBG26694Interproscan
PTHR21301REVERSE TRANSCRIPTASEInterproscan
PTHR13800TRANSIENT RECEPTOR POTENTIAL CATION CHANNEL, SUBFAMILY M, MEMBER 6Interproscan
PTHR10816MYELIN TRANSCRIPTION FACTOR 1-RELATEDInterproscan
PTHR46670ENDO/EXONUCLEASE/PHOSPHATASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR13251EPILEPSY HOLOPROSENCEPHALY CANDIDATE 1/TMEM1Interproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0005929Cellular ComponentciliumInterproscan
GO:0030991Cellular Componentintraciliary transport particle AInterproscan
GO:0035721Biological Processintraciliary retrograde transportInterproscan
GO:0060271Biological Processcilium assemblyInterproscan
GO:0015074Biological ProcessDNA integrationInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0004190Molecular Functionaspartic-type endopeptidase activityInterproscan
GO:0006508Biological ProcessproteolysisInterproscan
GO:0005261Molecular Functionmonoatomic cation channel activityInterproscan
GO:0005887Cellular Componentplasma membraneInterproscan
GO:0070838Biological Processmetal ion transportInterproscan
GO:0098655Biological Processmonoatomic cation transmembrane transportInterproscan
GO:0003714Molecular Functiontranscription corepressor activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0006357Biological Processregulation of transcription by RNA polymerase IIInterproscan
GO:0003824Molecular Functioncatalytic activityInterproscan
GO:0006891Biological Processintra-Golgi vesicle-mediated transportInterproscan
GO:0034498Biological Processearly endosome to Golgi transportInterproscan
GO:0048193Biological ProcessGolgi vesicle transportInterproscan
GO:1990071Cellular ComponentTRAPPII protein complexInterproscan

 KEGG pathway
KOEnzymeEnzyme IDpathwaymapIDSource
K09549PFDN2; prefoldin subunit 2-Ubiquitin systemko04121deepkoala
Chaperones and folding catalystsko03110deepkoala

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