Gene detail

Detailed information of Aala_g1078.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_041460826.1, uncharacterized protein K02A2.6-like [Lytechinus variegatus]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P10394	Retrovirus-related Pol polyprotein from transposon 412 OS=Drosophila melanogaster OX=7227 GN=POL PE=4 SV=1
P19199	Polyprotein P3 OS=Commelina yellow mottle virus OX=10653 PE=3 SV=2
Q02836	Gag-Pol polyprotein OS=Simian immunodeficiency virus agm.grivet (isolate AGM gr-1) OX=31684 GN=gag-pol PE=3 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00630	Filamin	Filamin/ABP280 repeat	Domain	Interproscan
PF03372	Exo_endo_phos	Endonuclease/Exonuclease/phosphatase family	Domain	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF00098	zf-CCHC	Zinc knuckle	Domain	Interproscan
PF00481	PP2C	Protein phosphatase 2C	Family	Interproscan
PF00117	GATase	Glutamine amidotransferase class-I	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR014756	Homologous_superfamily	Immunoglobulin E-set	Interproscan
IPR001298	Repeat	Filamin/ABP280 repeat	Interproscan
IPR017868	Repeat	Filamin/ABP280 repeat-like	Interproscan
IPR044801	Family	Filamin family	Interproscan
IPR013783	Homologous_superfamily	Immunoglobulin-like fold	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR005135	Domain	Endonuclease/exonuclease/phosphatase	Interproscan
IPR002035	Domain	von Willebrand factor, type A	Interproscan
IPR036465	Homologous_superfamily	von Willebrand factor A-like domain superfamily	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR021109	Homologous_superfamily	Aspartic peptidase domain superfamily	Interproscan
IPR036875	Homologous_superfamily	Zinc finger, CCHC-type superfamily	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR001995	Domain	Peptidase A2A, retrovirus, catalytic	Interproscan
IPR001878	Domain	Zinc finger, CCHC-type	Interproscan
IPR001969	Active_site	Aspartic peptidase, active site	Interproscan
IPR015655	Family	Protein phosphatase 2C	Interproscan
IPR001932	Domain	PPM-type phosphatase-like domain	Interproscan
IPR036457	Homologous_superfamily	PPM-type phosphatase-like domain superfamily	Interproscan
IPR044992	Family	Glutamine amidotransferase domain containing protein ChyE-like	Interproscan
IPR029062	Homologous_superfamily	Class I glutamine amidotransferase-like	Interproscan
IPR017926	Domain	Glutamine amidotransferase	Interproscan
IPR038793	Family	Lysine-rich arabinogalactan protein 19	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR38537	JITTERBUG, ISOFORM N	Interproscan
PTHR19446	REVERSE TRANSCRIPTASES	Interproscan
PTHR37984	PROTEIN CBG26694	Interproscan
PTHR13832	PROTEIN PHOSPHATASE 2C	Interproscan
PTHR42695	GLUTAMINE AMIDOTRANSFERASE YLR126C-RELATED	Interproscan
PTHR36549	LYSINE-RICH ARABINOGALACTAN PROTEIN 19	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0030036	Biological Process	actin cytoskeleton organization	Interproscan
GO:0051015	Molecular Function	actin filament binding	Interproscan
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0003676	Molecular Function	nucleic acid binding	Interproscan
GO:0008270	Molecular Function	zinc ion binding	Interproscan
GO:0004190	Molecular Function	aspartic-type endopeptidase activity	Interproscan
GO:0006508	Biological Process	proteolysis	Interproscan
GO:0004722	Molecular Function	protein serine/threonine phosphatase activity	Interproscan
GO:0006470	Biological Process	protein dephosphorylation	Interproscan
GO:0005829	Cellular Component	cytosol	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K04437	FLNA; filamin-A	-	Exosome	ko04147	deepkoala