Gene detail

Detailed information of Aala_g1080.t1 in Alatina alata

Genomic Location: :...
NR annotation: GFR86964.1, retrovirus-related Pol polyprotein LINE-1 [Elysia marginata]

Gene Structure

More details in Jbrowse

Sequence

CDS

Transcript

Protein

Uniprot

Uniprot term	Description
P16423	Retrovirus-related Pol polyprotein from type-2 retrotransposable element R2DM OS=Drosophila melanogaster OX=7227 GN=pol PE=4 SV=1
O00370	LINE-1 retrotransposable element ORF2 protein OS=Homo sapiens OX=9606 PE=1 SV=1
P11369	LINE-1 retrotransposable element ORF2 protein OS=Mus musculus OX=10090 GN=Pol PE=1 SV=2

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF02801	Ketoacyl-synt_C	Beta-ketoacyl synthase, C-terminal domain	Domain	Interproscan
PF02460	Patched	Patched family	Family	Interproscan
PF00109	ketoacyl-synt	Beta-ketoacyl synthase, N-terminal domain	Domain	Interproscan
PF21089	PKS_DH_N	Polyketide synthase dehydratase domain	Domain	Interproscan
PF16197	KAsynt_C_assoc	Ketoacyl-synthetase C-terminal extension	Family	Interproscan
PF00698	Acyl_transf_1	Acyl transferase domain	Domain	Interproscan
PF14765	PS-DH	Polyketide synthase dehydratase N-terminal domain	Domain	Interproscan
PF04499	SAPS	SIT4 phosphatase-associated protein	Family	Interproscan
PF00028	Cadherin	Cadherin domain	Domain	Interproscan
PF07994	NAD_binding_5	Myo-inositol-1-phosphate synthase	Family	Interproscan
PF12796	Ank_2	Ankyrin repeats (3 copies)	Repeat	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR001227	Homologous_superfamily	Acyl transferase domain superfamily	Interproscan
IPR016036	Homologous_superfamily	Malonyl-CoA ACP transacylase, ACP-binding	Interproscan
IPR000731	Domain	Sterol-sensing domain	Interproscan
IPR042104	Homologous_superfamily	Polyketide synthase, dehydratase domain superfamily	Interproscan
IPR020841	Domain	Polyketide synthase, beta-ketoacyl synthase domain	Interproscan
IPR050091	Family	Polyketide and Nonribosomal Peptide Biosynthesis Enzymes	Interproscan
IPR014031	Domain	Beta-ketoacyl synthase, C-terminal	Interproscan
IPR016035	Homologous_superfamily	Acyl transferase/acyl hydrolase/lysophospholipase	Interproscan
IPR036291	Homologous_superfamily	NAD(P)-binding domain superfamily	Interproscan
IPR016039	Homologous_superfamily	Thiolase-like	Interproscan
IPR049900	Domain	Polyketide/metazoan fatty acid synthase, dehydratase domain	Interproscan
IPR003392	Family	Protein patched/dispatched	Interproscan
IPR018201	Active_site	Beta-ketoacyl synthase, active site	Interproscan
IPR014030	Domain	Beta-ketoacyl synthase, N-terminal	Interproscan
IPR014043	Domain	Acyl transferase	Interproscan
IPR049552	Domain	Polyketide synthase, dehydratase domain, N-terminal	Interproscan
IPR032821	Domain	Polyketide synthase, C-terminal extension	Interproscan
IPR049551	Domain	Polyketide synthase, dehydratase domain, C-terminal	Interproscan
IPR007587	Family	SIT4 phosphatase-associated protein family	Interproscan
IPR015919	Homologous_superfamily	Cadherin-like superfamily	Interproscan
IPR002126	Domain	Cadherin-like	Interproscan
IPR020894	Conserved_site	Cadherin conserved site	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR002587	Family	Myo-inositol-1-phosphate synthase	Interproscan
IPR036770	Homologous_superfamily	Ankyrin repeat-containing domain superfamily	Interproscan
IPR002110	Repeat	Ankyrin repeat	Interproscan
IPR027417	Homologous_superfamily	P-loop containing nucleoside triphosphate hydrolase	Interproscan
IPR011029	Homologous_superfamily	Death-like domain superfamily	Interproscan
IPR050663	Family	Ankyrin Repeat and SOCS Box	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47027	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR43775	FATTY ACID SYNTHASE	Interproscan
PTHR24026	FAT ATYPICAL CADHERIN-RELATED	Interproscan
PTHR19446	REVERSE TRANSCRIPTASES	Interproscan
PTHR11510	MYO-INOSITOL-1 PHOSPHATE SYNTHASE	Interproscan
PTHR24193	ANKYRIN REPEAT PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0016740	Molecular Function	transferase activity	Interproscan
GO:0004312	Molecular Function	fatty acid synthase activity	Interproscan
GO:0006633	Biological Process	fatty acid biosynthetic process	Interproscan
GO:0016746	Molecular Function	acyltransferase activity	Interproscan
GO:0016020	Cellular Component	membrane	Interproscan
GO:0004315	Molecular Function	3-oxoacyl-[acyl-carrier-protein] synthase activity	Interproscan
GO:0019903	Molecular Function	protein phosphatase binding	Interproscan
GO:0043666	Biological Process	obsolete regulation of phosphoprotein phosphatase activity	Interproscan
GO:0005509	Molecular Function	calcium ion binding	Interproscan
GO:0007156	Biological Process	homophilic cell adhesion via plasma membrane adhesion molecules	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan
GO:0007155	Biological Process	cell adhesion	Interproscan
GO:0004512	Molecular Function	inositol-3-phosphate synthase activity	Interproscan
GO:0006021	Biological Process	inositol biosynthetic process	Interproscan
GO:0008654	Biological Process	phospholipid biosynthetic process	Interproscan
GO:0005737	Cellular Component	cytoplasm	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0000976	Molecular Function	transcription cis-regulatory region binding	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0045944	Biological Process	positive regulation of transcription by RNA polymerase II	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K06424	sspG; small acid-soluble spore protein G (minor)	-	Ribosome	ko03011	deepkoala
K06424	sspG; small acid-soluble spore protein G (minor)	-	Cell growth	-	deepkoala