Gene detail

Detailed information of Aala_g1090.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_053167420.1, 52 kDa repressor of the inhibitor of the protein kinase-like [Hemicordylus capensis]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
Q80U95	Ubiquitin-protein ligase E3C OS=Mus musculus OX=10090 GN=Ube3c PE=1 SV=2
Q15386	Ubiquitin-protein ligase E3C OS=Homo sapiens OX=9606 GN=UBE3C PE=1 SV=3
Q9SCQ2	E3 ubiquitin-protein ligase UPL7 OS=Arabidopsis thaliana OX=3702 GN=UPL7 PE=2 SV=1

Gene family	Subfamily
Ubiquitin Family	E3\|E3 activity\|HECT

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF06032	DUF917	Protein of unknown function (DUF917), N-terminal	Domain	Interproscan
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF00632	HECT	HECT-domain (ubiquitin-transferase)	Domain	Interproscan
PF00595	PDZ	PDZ domain	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR010318	Domain	DUF917, N-terminal domain	Interproscan
IPR027479	Homologous_superfamily	DUF917, N-terminal domain superfamily	Interproscan
IPR013087	Domain	Zinc finger C2H2-type	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR044611	Family	Ubiquitin-protein ligase E3A/B/C-like	Interproscan
IPR000569	Domain	HECT domain	Interproscan
IPR035983	Homologous_superfamily	HECT, E3 ligase catalytic domain	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR027124	Family	SWR1-complex protein 5/Craniofacial development protein 1/2	Interproscan
IPR001478	Domain	PDZ domain	Interproscan
IPR051844	Family	Sensory Perception USH2 Complex Protein	Interproscan
IPR036034	Homologous_superfamily	PDZ superfamily	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR47027	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR45700	UBIQUITIN-PROTEIN LIGASE E3C	Interproscan
PTHR23227	BUCENTAUR RELATED	Interproscan
PTHR23116	PDZ DOMAIN CONTAINING WHIRLIN AND HARMONIN-RELATED	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0000209	Biological Process	protein polyubiquitination	Interproscan
GO:0006511	Biological Process	ubiquitin-dependent protein catabolic process	Interproscan
GO:0061630	Molecular Function	ubiquitin protein ligase activity	Interproscan
GO:0004842	Molecular Function	ubiquitin-protein transferase activity	Interproscan
GO:0005634	Cellular Component	nucleus	Interproscan
GO:0006338	Biological Process	chromatin remodeling	Interproscan
GO:0005515	Molecular Function	protein binding	Interproscan
GO:0005886	Cellular Component	plasma membrane	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K06751	MHC1; MHC class I antigen	-	Glycosylphosphatidylinositol (GPI)-anchored proteins	ko00537	deepkoala