Gene detail

Detailed information of Aala_g1095.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_042883267.1, uncharacterized protein LOC122260182 [Penaeus japonicus]

Gene Structure

Sequence

Uniprot

Gene family

Uniprot term	Description
O02751	Craniofacial development protein 2 OS=Bos taurus OX=9913 GN=CFDP2 PE=1 SV=2
Q588U8	Craniofacial development protein 2 OS=Tragulus javanicus OX=9849 GN=CFDP2 PE=2 SV=1
P08548	LINE-1 reverse transcriptase homolog OS=Nycticebus coucang OX=9470 PE=4 SV=1

Gene family	Subfamily
Ubiquitin Family	ULD\|UFD\|RAWUL

Pfam domain

Pfam accession	Pfam name	Description	Type	Source
PF00078	RVT_1	Reverse transcriptase (RNA-dependent DNA polymerase)	Domain	Interproscan
PF14529	Exo_endo_phos_2	Endonuclease-reverse transcriptase	Domain	Interproscan
PF13923	zf-C3HC4_2	Zinc finger, C3HC4 type (RING finger)	Domain	Interproscan
PF16207	RAWUL	RAWUL domain RING finger- and WD40-associated ubiquitin-like	Domain	Interproscan
PF13843	DDE_Tnp_1_7	Transposase IS4	Domain	Interproscan

InterPro

InterPro term	Type	Description	Source
IPR026630	Family	EPM2A-interacting protein 1/ZBED8-like	Interproscan
IPR036691	Homologous_superfamily	Endonuclease/exonuclease/phosphatase superfamily	Interproscan
IPR043502	Homologous_superfamily	DNA/RNA polymerase superfamily	Interproscan
IPR000477	Domain	Reverse transcriptase domain	Interproscan
IPR005135	Domain	Endonuclease/exonuclease/phosphatase	Interproscan
IPR013083	Homologous_superfamily	Zinc finger, RING/FYVE/PHD-type	Interproscan
IPR001841	Domain	Zinc finger, RING-type	Interproscan
IPR032443	Domain	RAWUL domain	Interproscan
IPR017907	Conserved_site	Zinc finger, RING-type, conserved site	Interproscan
IPR051507	Family	Polycomb group RING finger	Interproscan
IPR050951	Family	Retrovirus-related Pol polyprotein	Interproscan
IPR043128	Homologous_superfamily	Reverse transcriptase/Diguanylate cyclase domain	Interproscan
IPR021109	Homologous_superfamily	Aspartic peptidase domain superfamily	Interproscan
IPR029526	Domain	PiggyBac transposable element-derived protein	Interproscan

PANTHER

PANTHER term	Description	Source
PTHR46601	ULP_PROTEASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR21301	REVERSE TRANSCRIPTASE	Interproscan
PTHR45913	EPM2A-INTERACTING PROTEIN 1	Interproscan
PTHR47027	REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEIN	Interproscan
PTHR45893	POLYCOMB GROUP RING FINGER PROTEIN	Interproscan
PTHR37984	PROTEIN CBG26694	Interproscan
PTHR47272	DDE_TNP_1_7 DOMAIN-CONTAINING PROTEIN	Interproscan

Gene Ontology

GO terms	Category	Description	Source
GO:0003824	Molecular Function	catalytic activity	Interproscan
GO:0006357	Biological Process	regulation of transcription by RNA polymerase II	Interproscan
GO:0035102	Cellular Component	PRC1 complex	Interproscan
GO:0036353	Biological Process	obsolete histone H2A-K119 monoubiquitination	Interproscan

KEGG pathway

KO	Enzyme	Enzyme ID	pathway	mapID	Source
K11488	PCGF3; polycomb group RING finger protein 3	-	Exosome	ko04147	deepkoala
			Transporters	ko02000	deepkoala
			Chromosome and associated proteins	ko03036	deepkoala