Detailed information of Aala_g11.t1 in Alatina alata

Genomic Location: :...
NR annotation: XP_002157256.3, RNA-binding protein 34 [Hydra vulgaris]


 Gene Structure
More details in Jbrowse  Sequence
CDS
Transcript
Protein
 Uniprot
Uniprot termDescription
Q8C5L7RNA-binding protein 34 OS=Mus musculus OX=10090 GN=Rbm34 PE=1 SV=2
Q5M9F1RNA-binding protein 34 OS=Rattus norvegicus OX=10116 GN=Rbm34 PE=1 SV=1
P42696RNA-binding protein 34 OS=Homo sapiens OX=9606 GN=RBM34 PE=1 SV=2

 Pfam domain
Pfam accessionPfam nameDescriptionTypeSource
PF000027tm_27 transmembrane receptor (Secretin family)FamilyInterproscan
PF12722Hid1High-temperature-induced dauer-formation proteinFamilyInterproscan
PF00076RRM_1RNA recognition motifDomainInterproscan
PF07500TFIIS_MTranscription factor S-II (TFIIS), central domainDomainInterproscan
PF10350DUF2428THADA/TRM732, DUF2428DomainInterproscan
PF02223Thymidylate_kinThymidylate kinaseDomainInterproscan

 InterPro
InterPro termTypeDescriptionSource
IPR000832FamilyGPCR, family 2, secretin-likeInterproscan
IPR026705FamilyHid-1/Ecm30Interproscan
IPR012677Homologous_superfamilyNucleotide-binding alpha-beta plait domain superfamilyInterproscan
IPR035979Homologous_superfamilyRNA-binding domain superfamilyInterproscan
IPR034221DomainRBM34, RNA recognition motif 2Interproscan
IPR000504DomainRNA recognition motif domainInterproscan
IPR050441FamilyRNA-binding motifInterproscan
IPR003618DomainTranscription elongation factor S-II, central domainInterproscan
IPR036575Homologous_superfamilyTranscription elongation factor S-II, central domain superfamilyInterproscan
IPR051954FamilytRNA (32-2'-O)-methyltransferase regulator THADAInterproscan
IPR019442DomainTHADA/TRM732, DUF2428Interproscan
IPR039430DomainThymidylate kinase-like domainInterproscan
IPR027417Homologous_superfamilyP-loop containing nucleoside triphosphate hydrolaseInterproscan

 PANTHER
PANTHER termDescriptionSource
PTHR46238REVERSE TRANSCRIPTASE DOMAIN-CONTAINING PROTEINInterproscan
PTHR21575PROTEIN HID1Interproscan
PTHR48034TRANSFORMER-2 SEX-DETERMINING PROTEIN-RELATEDInterproscan
PTHR11477TRANSCRIPTION FACTOR S-II ZINC FINGER DOMAIN-CONTAINING PROTEINInterproscan
PTHR14387THADA/DEATH RECEPTOR INTERACTING PROTEINInterproscan
PTHR10344THYMIDYLATE KINASEInterproscan

 Gene Ontology
GO termsCategoryDescriptionSource
GO:0004930Molecular FunctionG protein-coupled receptor activityInterproscan
GO:0007186Biological ProcessG protein-coupled receptor signaling pathwayInterproscan
GO:0016020Cellular ComponentmembraneInterproscan
GO:0000138Cellular ComponentGolgi trans cisternaInterproscan
GO:0005797Cellular ComponentGolgi medial cisternaInterproscan
GO:0003676Molecular Functionnucleic acid bindingInterproscan
GO:0003723Molecular FunctionRNA bindingInterproscan
GO:0005681Cellular Componentspliceosomal complexInterproscan
GO:0048026Biological Processpositive regulation of mRNA splicing, via spliceosomeInterproscan
GO:0006351Biological ProcessDNA-templated transcriptionInterproscan
GO:0005829Cellular ComponentcytosolInterproscan
GO:0030488Biological ProcesstRNA methylationInterproscan
GO:0004550Molecular Functionnucleoside diphosphate kinase activityInterproscan
GO:0004798Molecular Functionthymidylate kinase activityInterproscan
GO:0005634Cellular ComponentnucleusInterproscan
GO:0005737Cellular ComponentcytoplasmInterproscan
GO:0005739Cellular ComponentmitochondrionInterproscan
GO:0006227Biological ProcessdUDP biosynthetic processInterproscan
GO:0006233Biological ProcessdTDP biosynthetic processInterproscan
GO:0006235Biological ProcessdTTP biosynthetic processInterproscan

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